ENSCPOG00000000948 (Cavia porcellus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSCPOG00000000948 T02385_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000000852 CCCH ZF 3 24
ENSCPOP00000000852 CCCH ZF 28 53
ENSCPOP00000000852 CCCH ZF 152 177
ENSCPOP00000000852 CCCH ZF 310 335

Links

Other CCCH ZF family RBPs
Other Cavia porcellus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.970
LOC100065893 Equus caballus ENSECAG00000017929 N 0.970
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.960
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.960
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.960
MKRN1 Felis catus ENSFCAG00000013043 N 0.960
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.952
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.950
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.942
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.942
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.942
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.933
MKRN1 Homo sapiens ENSG00000133606 N 0.933
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.933
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.923
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.923
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.923
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.900
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.900
MKRN1 Sorex araneus ENSSARG00000013683 N 0.890
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.890
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.875
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.846
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.840
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.837
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.837
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.837
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.827
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.820
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.788
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.788
AAH74368 Xenopus laevis AAH74368 N 0.777
Q6GLT5 Xenopus laevis Q6GLT5 N 0.777
MKRN1 Oryzias latipes ENSORLG00000012765 N 0.771
mkrn1 Danio rerio ENSDARG00000041665 N 0.736
MKRN1 Gasterosteus aculeatus ENSGACG00000019227 N 0.726
NP_001072050.1 Takifugu rubripes ENSTRUG00000012057 N 0.717
MKRN1 Tetraodon nigroviridis ENSTNIG00000007231 N 0.708