MKRN1 (Sorex araneus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSSARG00000013683 T03357_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000012365 CCCH ZF 61 81
ENSSARP00000012365 CCCH ZF 85 105
ENSSARP00000012365 CCCH ZF 207 232
ENSSARP00000012365 CCCH ZF 365 390

Links

Other CCCH ZF family RBPs
Other Sorex araneus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.968
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.957
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.909
LOC100065893 Equus caballus ENSECAG00000017929 N 0.909
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.909
MKRN1 Felis catus ENSFCAG00000013043 N 0.909
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.899
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.899
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.899
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.890
MKRN1 Homo sapiens ENSG00000133606 N 0.879
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.879
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.865
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.865
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.865
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.856
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.846
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.846
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.846
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.838
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.837
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.798
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.778
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.769
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.769
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.769
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.769
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.758
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.750
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.721
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.712
AAH74368 Xenopus laevis AAH74368 N 0.709
Q6GLT5 Xenopus laevis Q6GLT5 N 0.709