MKRN1 (Taeniopygia guttata)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTGUG00000011669 T03469_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000012028 CCCH ZF 1 20
ENSTGUP00000012028 CCCH ZF 28 49
ENSTGUP00000012028 CCCH ZF 147 172
ENSTGUP00000012028 CCCH ZF 305 330

Links

Other CCCH ZF family RBPs
Other Taeniopygia guttata RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.979
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.910
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.890
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.880
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.880
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.854
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.837
LOC100065893 Equus caballus ENSECAG00000017929 N 0.837
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.837
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.827
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.827
MKRN1 Felis catus ENSFCAG00000013043 N 0.827
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.827
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.820
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.806
MKRN1 Homo sapiens ENSG00000133606 N 0.806
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.798
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.792
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.788
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.788
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.788
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.788
AAH74368 Xenopus laevis AAH74368 N 0.788
Q6GLT5 Xenopus laevis Q6GLT5 N 0.788
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.786
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.779
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.779
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.776
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.760
MKRN1 Sorex araneus ENSSARG00000013683 N 0.758
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.745
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.733
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.725
mkrn1 Danio rerio ENSDARG00000041665 N 0.708