MKRN1 (Callithrix jacchus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSCJAG00000004068 T02346_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000007382 CCCH ZF 57 82
ENSCJAP00000007382 CCCH ZF 88 111
ENSCJAP00000007382 CCCH ZF 211 235
ENSCJAP00000007382 CCCH ZF 368 393
ENSCJAP00000024770 CCCH ZF 55 80
ENSCJAP00000024770 CCCH ZF 86 109
ENSCJAP00000024770 CCCH ZF 209 233
ENSCJAP00000024770 CCCH ZF 366 391

Links

Other CCCH ZF family RBPs
Other Callithrix jacchus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.846
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.846
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.846
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.846
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.846
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.837
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.837
MKRN1 Homo sapiens ENSG00000133606 N 0.837
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.837
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.833
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.824
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.814
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.808
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.806
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.804
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.794
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.794
LOC100065893 Equus caballus ENSECAG00000017929 N 0.788
MKRN1 Felis catus ENSFCAG00000013043 N 0.788
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.788
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.788
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.788
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.779
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.779
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.779
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.757
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.735
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.731
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.725
MKRN1 Sorex araneus ENSSARG00000013683 N 0.721
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.721
MKRN1 Oryzias latipes ENSORLG00000012765 N 0.714
AAH74368 Xenopus laevis AAH74368 N 0.706
Q6GLT5 Xenopus laevis Q6GLT5 N 0.706