ybx2 (Xenopus tropicalis)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSXETG00000025267 T17071_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000054038 CSD 69 109

Links

Other CSD family RBPs
Other Xenopus tropicalis RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.927
Ame_R016026 Ailuropoda melanoleuca Ame_R016026 N 0.927
Ybx1 Dipodomys ordii ENSDORG00000016627 N 0.905
YBX1 Tupaia belangeri ENSTBEG00000015642 N 0.905
ENSOCUG00000024588 Oryctolagus cuniculus ENSOCUG00000024588 N 0.864
ENSOCUG00000026608 Oryctolagus cuniculus ENSOCUG00000026608 N 0.818
ENSOCUG00000021258 Oryctolagus cuniculus ENSOCUG00000021258 N 0.800
YBX2 Pteropus vampyrus ENSPVAG00000005050 N 0.784
YBX2 Vicugna pacos ENSVPAG00000003104 I 0.784
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.784
YBX2 Microcebus murinus ENSMICG00000012453 I 0.784
ENSGGOG00000023840 Gorilla gorilla ENSGGOG00000023840 N 0.780
CPIJ002248 Culex quinquefasciatus CPIJ002248 N 0.762
CpipJ_CPIJ002248 Culex pipiens CpipJ_CPIJ002248 N 0.762
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.761
ENSOCUG00000022716 Oryctolagus cuniculus ENSOCUG00000022716 N 0.755
CSDA Tursiops truncatus ENSTTRG00000008045 I 0.745
YBOX1_RABIT Oryctolagus cuniculus ENSOCUG00000028047 I 0.731
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.727
ENSSARG00000007896 Sorex araneus ENSSARG00000007896 I 0.717
YBX1 Procavia capensis ENSPCAG00000008397 I 0.717
Ame_R019252 Ailuropoda melanoleuca Ame_R019252 I 0.717
YB-1 Homo sapiens ENSG00000065978 D 0.717
ENSGGOG00000004758 Gorilla gorilla ENSGGOG00000004758 I 0.717
CSDA Oryctolagus cuniculus ENSOCUG00000001889 I 0.717
ENSETEG00000004125 Echinops telfairi ENSETEG00000004125 I 0.717
CSDA Felis catus ENSFCAG00000018959 I 0.717
Ame_R016025 Ailuropoda melanoleuca Ame_R016025 I 0.704
CSDA Gorilla gorilla ENSGGOG00000001352 I 0.704