CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ACLA_088200
(
Aspergillus clavatus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CADACLAG00008695
T18184_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADACLAP00008485
KH
184
233
LSRAIGRIAGKDGKTKFAIENASRTRVVLQGTKITILGRFKDLGIAQEAI
Links
Other
KH
family RBPs
Other
Aspergillus clavatus
RBPs
68 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AFUA_6G06430
Aspergillus fumigatus
CADAFUAG00001979
N
0.960
NFIA_052070
Neosartorya fischeri
CADNFIAG00004473
N
0.960
estExt_fgenesh1_kg.C_140013
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_140013
N
0.780
SS1G_04290
Sclerotinia sclerotiorum
SS1G_04290
N
0.780
BC1G_12211
Botrytis cinerea
BC1G_12211
N
0.780
Pc14g01220
Penicillium chrysogenum
Pc14g01220
N
0.780
CIMG_07268
Coccidioides immitis
CIMG_07268
N
0.760
EAT88982.1
Phaeosphaeria nodorum
EAT88982.1
N
0.760
YALI0E01122g
Yarrowia lipolytica
YALI0E01122g
N
0.760
PMAA_046470
Penicillium marneffei
PMAA_046470
N
0.760
CPSG_08784
Coccidioides posadasii
CPSG_08784
N
0.760
SNOG_03777
Stagonospora nodorum
SNOG_03777
N
0.760
PTRG_02803
Pyrenophora tritici repentis
PTRG_02803
N
0.760
e_gw1.3.1059.1
Mycosphaerella fijiensis
e_gw1.3.1059.1
N
0.760
HCAG_04100
Histoplasma capsulatum
HCAG_04100
N
0.740
e_gww2.1.865.1
Phanerochaete chrysosporium
e_gww2.1.865.1
N
0.740
TESG_04215
Trichophyton tonsurans
TESG_04215
N
0.740
UREG_07832
Uncinocarpus reesii
UREG_07832
N
0.740
TRV_03730
Trichophyton verrucosum
TRV_03730
N
0.740
SPOG_00402
Schizosaccharomyces cryophilus
SPOG_00402
N
0.740
MCYG_07269
Microsporum canis
MCYG_07269
N
0.740
TEQG_07954
Trichophyton equinum
TEQG_07954
N
0.740
fgenesh3_pm.54__15
Postia placenta
fgenesh3_pm.54__15
N
0.740
MGYG_04767
Microsporum gypseum
MGYG_04767
N
0.740
Scas_Contig632.19
Saccharomyces castellii
Scas_Contig632.19
N
0.740
ARB_00984
Arthroderma benhamiae
ARB_00984
N
0.740
TERG_01665
Trichophyton rubrum
TERG_01665
N
0.740
BDBG_01721
Blastomyces dermatitidis
BDBG_01721
N
0.720
PABG_01374
Paracoccidioides brasiliensis
PABG_01374
N
0.720
LELG_05249
Lodderomyces elongisporus
LELG_05249
N
0.720
orf19.7618
Candida albicans
orf19.7618
N
0.720
DEHA0G05258g
Debaryomyces hansenii
DEHA0G05258g
N
0.720
CTRG_05813
Candida tropicalis
CTRG_05813
N
0.720
CPAG_01545
Candida parapsilosis
CPAG_01545
N
0.720
CLUG_01545
Candida lusitaniae
CLUG_01545
N
0.720
SAKL0G03740g
Lachancea kluyveri
SAKL0G03740g
N
0.720
estExt_Genewise1Plus.C_10659
Myceliophthora thermophila
estExt_Genewise1Plus.C_10659
N
0.720
estExt_Genewise1Plus.C_chr_70397
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_70397
N
0.720
Cd36_35296
Candida dubliniensis
Cd36_35296
N
0.720
CAGL0K09460g
Candida glabrata
CAGL0K09460g
N
0.720
ZYRO0D11440g
Zygosaccharomyces rouxii
ZYRO0D11440g
N
0.720
A7THL8_VANPO
Vanderwaltozyma polyspora
A7THL8_VANPO
N
0.720
e_gw1.12.287.1
Serpula lacrymans
e_gw1.12.287.1
N
0.720
estExt_genewise1_human.C_chr_1.20929
Pichia stipitis
estExt_genewise1_human.C_chr_1.20929
N
0.720
gw1.1.2472.1
Pleurotus ostreatus
gw1.1.2472.1
N
0.720
e_gw1.2.2126.1
Schizophyllum commune
e_gw1.2.2126.1
N
0.720
RO3G_05288
Rhizopus oryzae
RO3G_05288
N
0.700
RO3G_00885
Rhizopus oryzae
RO3G_00885
N
0.700
PTTG_01898
Puccinia triticina
PTTG_01898
N
0.700
rbp28
Schizosaccharomyces pombe
SPAC2C4.11c
N
0.700
PNO1
Saccharomyces cerevisiae
YOR145C
N
0.700
estExt_Genewise1.C_10689
Thielavia terrestris
estExt_Genewise1.C_10689
N
0.700
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
N
0.700
estExt_Genewise1.C_260084
Melampsora laricis populina
estExt_Genewise1.C_260084
N
0.700
SOCG_04140
Schizosaccharomyces octosporus
SOCG_04140
N
0.700
23888_YOR145C
Saccharomyces bayanus
23888_YOR145C
N
0.700
KLLA0C06446g
Kluyveromyces lactis
KLLA0C06446g
N
0.700
e_gw1.3.2749.1
Cryphonectria parasitica
e_gw1.3.2749.1
N
0.700
KLTH0G02574g
Kluyveromyces thermotolerans
KLTH0G02574g
N
0.700
Kwal_18864
Kluyveromyces waltii
Kwal_18864
N
0.700
PNO1
Ashbya gossypii
PNO1
N
0.700
e_gw1.2.756.1
Heterobasidion annosum
e_gw1.2.756.1
N
0.700
FGSG_01345
Fusarium graminearum
FGSG_01345
N
0.700
Skud_Contig1833.8
Saccharomyces kudriavzevii
Skud_Contig1833.8
N
0.700
20872_YOR145C
Saccharomyces paradoxus
20872_YOR145C
N
0.700
FVEG_01480
Fusarium verticillioides
FVEG_01480
N
0.700
FOXG_00036
Fusarium oxysporum
FOXG_00036
N
0.700
PGUG_02960
Candida guilliermondii
PGUG_02960
N
0.700