CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gw1.12.287.1
(
Serpula lacrymans
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
e_gw1.12.287.1
T21652_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.12.287.1
KH
135
184
LSRAIGRIAGQDGKTKFTIENASRTRIVLADTKIHIMGSFQNIKIARDAI
Links
Other
KH
family RBPs
Other
Serpula lacrymans
RBPs
229 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
gw1.1.2472.1
Pleurotus ostreatus
gw1.1.2472.1
N
1.000
fgenesh3_pm.54__15
Postia placenta
fgenesh3_pm.54__15
N
0.980
e_gww2.1.865.1
Phanerochaete chrysosporium
e_gww2.1.865.1
N
0.980
estExt_fgenesh2_kg.C_20130
Agaricus bisporus
estExt_fgenesh2_kg.C_20130
N
0.960
e_gwh1.2.512.1
Laccaria bicolor
e_gwh1.2.512.1
N
0.960
e_gw1.2.756.1
Heterobasidion annosum
e_gw1.2.756.1
N
0.940
e_gw1.2.2126.1
Schizophyllum commune
e_gw1.2.2126.1
N
0.920
RO3G_05288
Rhizopus oryzae
RO3G_05288
N
0.920
RO3G_00885
Rhizopus oryzae
RO3G_00885
N
0.920
estExt_Genewise1Plus.C_10658
Mucor circinelloides
estExt_Genewise1Plus.C_10658
N
0.900
estExt_Genewise1Plus.C_250095
Phycomyces blakesleeanus
estExt_Genewise1Plus.C_250095
N
0.860
XP_001202155.1
Strongylocentrotus purpuratus
XP_001202155.1
N
0.860
XP_798188.2
Strongylocentrotus purpuratus
XP_798188.2
N
0.860
XP_001202160.1
Strongylocentrotus purpuratus
XP_001202160.1
N
0.860
e_gw1.15.315.1
Tremella mesenterica
e_gw1.15.315.1
N
0.860
XP_791733.2
Strongylocentrotus purpuratus
XP_791733.2
N
0.860
PNO1
Taeniopygia guttata
ENSTGUG00000002369
N
0.860
AAH42279
Xenopus laevis
AAH42279
N
0.840
Q6VBQ6_ORYLA
Oryzias latipes
ENSORLG00000002371
N
0.840
pno1
Danio rerio
ENSDARG00000008502
N
0.840
PTTG_01898
Puccinia triticina
PTTG_01898
N
0.840
PNO1_CHICK
Gallus gallus
ENSGALG00000009093
N
0.840
PNO1
Meleagris gallopavo
ENSMGAG00000004514
N
0.840
AMAG_12889
Allomyces macrogynus
AMAG_12889
N
0.840
AMAG_14219
Allomyces macrogynus
AMAG_14219
N
0.840
AAQ24169
Xenopus laevis
AAQ24169
N
0.840
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.840
GP3.070330
Batrachochytrium dendrobatidis
GP3.070330
N
0.840
estExt_Genewise1.C_260084
Melampsora laricis populina
estExt_Genewise1.C_260084
N
0.840
pno1
Xenopus tropicalis
ENSXETG00000017349
N
0.840
PNO1
Gorilla gorilla
ENSGGOG00000009158
N
0.820
PNO1
Homo sapiens
ENSG00000115946
N
0.820
fgenesh2_pg.scaffold_196000015
Branchiostoma floridae
fgenesh2_pg.scaffold_196000015
N
0.820
PNO1
Loxodonta africana
ENSLAFG00000000046
N
0.820
PNO1
Macropus eugenii
ENSMEUG00000004504
N
0.820
Q7YRC8_MACMU
Macaca mulatta
ENSMMUG00000017461
N
0.820
fgenesh1_pg.scaffold_18000119
Nematostella vectensis
fgenesh1_pg.scaffold_18000119
N
0.820
PNO1
Microcebus murinus
ENSMICG00000010897
N
0.820
fgenesh1_pm.C_scaffold_5000030
Phytophthora ramorum
fgenesh1_pm.C_scaffold_5000030
N
0.820
PNO1
Erinaceus europaeus
ENSEEUG00000009611
N
0.820
fgenesh2_pm.scaffold_78000001
Branchiostoma floridae
fgenesh2_pm.scaffold_78000001
N
0.820
LOC100389955
Callithrix jacchus
ENSCJAG00000006564
N
0.820
PNO1
Canis familiaris
ENSCAFG00000003256
N
0.820
PNO1_BOVIN
Bos taurus
ENSBTAG00000010604
N
0.820
PNO1
Anolis carolinensis
ENSACAG00000001218
N
0.820
PNO1
Cavia porcellus
ENSCPOG00000010130
N
0.820
Ame_R013855
Ailuropoda melanoleuca
Ame_R013855
N
0.820
Pno1
Dipodomys ordii
ENSDORG00000006867
N
0.820
XM_001095777.1
Macaca mulatta
ENSMMUG00000030357
N
0.820
s_468317
Phytophthora sojae
s_468317
N
0.820
LOC100061904
Equus caballus
ENSECAG00000011263
N
0.820
PNO1
Ornithorhynchus anatinus
ENSOANG00000008388
N
0.820
e_gw1.8.261.1
Sporobolomyces roseus
e_gw1.8.261.1
N
0.820
estExt_fgenesh1_kg.C_140013
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_140013
N
0.820
SPRG_02415
Saprolegnia parasitica
SPRG_02415
N
0.820
estExt_Genewise1.C_5820041
Capitella teleta
estExt_Genewise1.C_5820041
N
0.820
Chlre2_kg.scaffold_20000177
Chlamydomonas reinhardtii
Chlre2_kg.scaffold_20000177
N
0.820
PNO1
Tetraodon nigroviridis
ENSTNIG00000009825
N
0.820
PNO1
Vicugna pacos
ENSVPAG00000012083
N
0.820
PNO1
Takifugu rubripes
ENSTRUG00000012470
N
0.820
rbp28
Schizosaccharomyces pombe
SPAC2C4.11c
N
0.820
PNO1
Sus scrofa
ENSSSCG00000008352
N
0.820
Pno1
Rattus norvegicus
ENSRNOG00000005524
N
0.820
PNO1
Ochotona princeps
ENSOPRG00000009643
N
0.820
ENSOCUG00000022236
Oryctolagus cuniculus
ENSOCUG00000022236
N
0.820
ENSOCUG00000006100
Oryctolagus cuniculus
ENSOCUG00000006100
N
0.820
PNO1
Tursiops truncatus
ENSTTRG00000014002
N
0.820
estExt_Genewise1Plus.C_600117
Volvox carteri
estExt_Genewise1Plus.C_600117
N
0.820
PNO1
Procavia capensis
ENSPCAG00000016146
N
0.820
PNO1
Pteropus vampyrus
ENSPVAG00000012695
N
0.820
PNO1
Pan troglodytes
ENSPTRG00000011999
N
0.820
ENSPPYG00000012353
Pongo pygmaeus
ENSPPYG00000012353
N
0.820
PNO1
Monodelphis domestica
ENSMODG00000003567
N
0.820
PNO1
Myotis lucifugus
ENSMLUG00000010850
N
0.820
SPOG_00402
Schizosaccharomyces cryophilus
SPOG_00402
N
0.820
XP_002162789.1
Hydra magnipapillata
XP_002162789.1
N
0.820
PITG_01680
Phytophthora infestans
PITG_01680
N
0.820
Pno1
Mus musculus
ENSMUSG00000020116
N
0.800
estExt_fgenesh1_pg.C_190237
Phytophthora capsici
estExt_fgenesh1_pg.C_190237
N
0.800
CNBG_1323
Cryptococcus neoformans
CNBG_1323
N
0.800
Medtr3g080390
Medicago truncatula
Medtr3g080390
N
0.800
YALI0E01122g
Yarrowia lipolytica
YALI0E01122g
N
0.800
PNO1
Gasterosteus aculeatus
ENSGACG00000012047
N
0.800
fgeneshTA2_pg.C_scaffold_14000176
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_14000176
N
0.780
Glyma08g44800.1
Glycine max
Glyma08g44800.1
N
0.780
SOCG_04140
Schizosaccharomyces octosporus
SOCG_04140
N
0.780
ENSCJAG00000022611
Callithrix jacchus
ENSCJAG00000022611
N
0.780
Glyma18g08100.1
Glycine max
Glyma18g08100.1
N
0.780
Glyma18g08080.1
Glycine max
Glyma18g08080.1
N
0.780
SS1G_04290
Sclerotinia sclerotiorum
SS1G_04290
N
0.780
SJAG_03872
Schizosaccharomyces japonicus
SJAG_03872
N
0.780
CIMG_07268
Coccidioides immitis
CIMG_07268
N
0.780
3712.m00082
Tetrahymena thermophila
3712.m00082
N
0.780
Pc14g01220
Penicillium chrysogenum
Pc14g01220
N
0.780
BC1G_12211
Botrytis cinerea
BC1G_12211
N
0.780
CPSG_08784
Coccidioides posadasii
CPSG_08784
N
0.780
UM03495
Ustilago maydis
UM03495
N
0.780
EDP42908.1
Malassezia globosa
EDP42908.1
N
0.780
cassava30594.valid.m1
Manihot esculenta
cassava30594.valid.m1
N
0.780
Scas_Contig632.19
Saccharomyces castellii
Scas_Contig632.19
N
0.780
BDBG_01721
Blastomyces dermatitidis
BDBG_01721
N
0.760
B9GHH7_POPTR
Populus trichocarpa
POPTR_0001s47320
N
0.760
LjSGA_017760.2
Lotus japonicus
LjSGA_017760.2
N
0.760
SAKL0G03740g
Lachancea kluyveri
SAKL0G03740g
N
0.760
ZYRO0D11440g
Zygosaccharomyces rouxii
ZYRO0D11440g
N
0.760
EAT88982.1
Phaeosphaeria nodorum
EAT88982.1
N
0.760
fgeneshCV_pg.C_scaffold_11000142
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_11000142
N
0.760
EHI_065870
Entamoeba histolytica
EHI_065870
N
0.760
e_gw1.4.614.1
Micromonas pusilla
e_gw1.4.614.1
N
0.760
e_gw1.3.1059.1
Mycosphaerella fijiensis
e_gw1.3.1059.1
N
0.760
e_gw1.18.222.1
Chlorella NC64A
e_gw1.18.222.1
N
0.760
e_gw1.7.528.1
Ostreococcus RCC809
e_gw1.7.528.1
N
0.760
estExt_Genewise1Plus.C_chr_70397
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_70397
N
0.760
estExt_genewise1_human.C_chr_1.20929
Pichia stipitis
estExt_genewise1_human.C_chr_1.20929
N
0.760
e_gwEuk.7.409.1
Ostreococcus lucimarinus
e_gwEuk.7.409.1
N
0.760
Cucsa.201760
Cucumis sativus
Cucsa.201760
N
0.760
Cucsa.041830
Cucumis sativus
Cucsa.041830
N
0.760
Genemark1.5719_g
Coccomyxa C 169
Genemark1.5719_g
N
0.760
EDI_198550
Entamoeba dispar
EDI_198550
N
0.760
GSPATP00020703001
Paramecium tetraurelia
GSPATP00020703001
N
0.760
28525.m000262
Ricinus communis
28525.m000262
N
0.760
GSPATP00021981001
Paramecium tetraurelia
GSPATP00021981001
N
0.760
cassava7030.valid.m1
Manihot esculenta
cassava7030.valid.m1
N
0.760
B9N5M8_POPTR
Populus trichocarpa
POPTR_0011s16880
N
0.760
ARB_00984
Arthroderma benhamiae
ARB_00984
N
0.760
CLUG_01545
Candida lusitaniae
CLUG_01545
N
0.760
A7THL8_VANPO
Vanderwaltozyma polyspora
A7THL8_VANPO
N
0.760
CAGL0K09460g
Candida glabrata
CAGL0K09460g
N
0.760
SNOG_03777
Stagonospora nodorum
SNOG_03777
N
0.760
PTRG_02803
Pyrenophora tritici repentis
PTRG_02803
N
0.760
MGYG_04767
Microsporum gypseum
MGYG_04767
N
0.760
orf19.7618
Candida albicans
orf19.7618
N
0.760
Cd36_35296
Candida dubliniensis
Cd36_35296
N
0.760
nasonia_NCBI_hmm120183
Nasonia vitripennis
nasonia_NCBI_hmm120183
N
0.760
TESG_04215
Trichophyton tonsurans
TESG_04215
N
0.760
TERG_01665
Trichophyton rubrum
TERG_01665
N
0.760
TEQG_07954
Trichophyton equinum
TEQG_07954
N
0.760
TRV_03730
Trichophyton verrucosum
TRV_03730
N
0.760
UREG_07832
Uncinocarpus reesii
UREG_07832
N
0.760
DGIL_AUG5s4501g8t1
Acyrtosiphon pisum
DGIL_AUG5s4501g8t1
N
0.760
amel4_ncbi_hmm14037
Apis mellifera
amel4_ncbi_hmm14037
N
0.760
MCYG_07269
Microsporum canis
MCYG_07269
N
0.760
SPPG_04498
Spizellomyces punctatus
SPPG_04498
N
0.760
CTRG_05813
Candida tropicalis
CTRG_05813
N
0.760
LELG_05249
Lodderomyces elongisporus
LELG_05249
N
0.760
XM_001110046.1
Macaca mulatta
ENSMMUG00000003556
N
0.760
HCAG_04100
Histoplasma capsulatum
HCAG_04100
N
0.760
CPAG_01545
Candida parapsilosis
CPAG_01545
N
0.760
DEHA0G05258g
Debaryomyces hansenii
DEHA0G05258g
N
0.760
WUBG_12774
Wuchereria bancrofti
WUBG_12774
N
0.740
fgenesh1_pm.C_scaffold_14000035
Trichoderma atroviride
fgenesh1_pm.C_scaffold_14000035
N
0.740
KLLA0C06446g
Kluyveromyces lactis
KLLA0C06446g
N
0.740
PK08146.1
Cannabis sativa
PK08146.1
N
0.740
MDP0000754021
Malus x domestica
MDP0000754021
N
0.740
BGIBMGA014064
Bombyx mori
BGIBMGA014064
N
0.740
estExt_fgenesh1_pg.C_110137
Monosiga brevicollis
estExt_fgenesh1_pg.C_110137
N
0.740
Kwal_18864
Kluyveromyces waltii
Kwal_18864
N
0.740
MDP0000136407
Malus x domestica
MDP0000136407
N
0.740
MDP0000120063
Malus x domestica
MDP0000120063
N
0.740
Bm1_42995
Brugia malayi
Bm1_42995
N
0.740
KLTH0G02574g
Kluyveromyces thermotolerans
KLTH0G02574g
N
0.740
estExt_fgenesh5_pg.C_40050
Trichoderma reesei
estExt_fgenesh5_pg.C_40050
N
0.740
FGSG_01345
Fusarium graminearum
FGSG_01345
N
0.740
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
N
0.740
estExt_Genewise1Plus.C_91132
Trichoderma virens
estExt_Genewise1Plus.C_91132
N
0.740
MDP0000265633
Malus x domestica
MDP0000265633
N
0.740
FOXG_00036
Fusarium oxysporum
FOXG_00036
N
0.740
PGUG_02960
Candida guilliermondii
PGUG_02960
N
0.740
PNO1
Saccharomyces cerevisiae
YOR145C
N
0.740
ENSCSAVG00000001303
Ciona savignyi
ENSCSAVG00000001303
N
0.740
PNO1
Ashbya gossypii
PNO1
N
0.740
PABG_01374
Paracoccidioides brasiliensis
PABG_01374
N
0.740
PHUM356890
Pediculus humanus
PHUM356890
N
0.740
LOAG_05624
Loa loa
LOAG_05624
N
0.740
EFA79428.1
Polysphondylium pallidum
EFA79428.1
N
0.740
ENSCING00000009577
Ciona intestinalis
ENSCING00000009577
N
0.740
Skud_Contig1833.8
Saccharomyces kudriavzevii
Skud_Contig1833.8
N
0.740
ppa011086m
Prunus persica
ppa011086m
N
0.740
FVEG_01480
Fusarium verticillioides
FVEG_01480
N
0.740
0700010277
Ostreococcus tauri
0700010277
N
0.740
ppa009897m
Prunus persica
ppa009897m
N
0.740
23888_YOR145C
Saccharomyces bayanus
23888_YOR145C
N
0.740
20872_YOR145C
Saccharomyces paradoxus
20872_YOR145C
N
0.740
27316
Aureococcus anophagefferens
27316
N
0.740
e_gw1.13.100.1
Volvox carteri
e_gw1.13.100.1
N
0.740
20359_YOR145C
Saccharomyces mikatae
20359_YOR145C
N
0.725
CMU_025600
Cryptosporidium muris
CMU_025600
N
0.725
GK20148
Drosophila willistoni
FBgn0222145
N
0.725
GRMZM2G085005
Zea mays
GRMZM2G085005
N
0.720
GRMZM2G139198
Zea mays
GRMZM2G139198
N
0.720
LOC_Os03g02420
Oryza sativa
LOC_Os03g02420
N
0.720
estExt_Genewise1Plus.C_10659
Myceliophthora thermophila
estExt_Genewise1Plus.C_10659
N
0.720
THAPSDRAFT_35041
Thalassiosira pseudonana
Thaps35041
N
0.720
SB03G036840
Sorghum bicolor
Sb03g036840
N
0.720
LOC_Os01g57910
Oryza sativa
LOC_Os01g57910
N
0.720
LbrM34_V2.3470
Leishmania braziliensis
LbrM34_V2.3470
N
0.720
ACLA_088200
Aspergillus clavatus
CADACLAG00008695
N
0.720
BRADI2G52180
Brachypodium distachyon
BRADI2G52180
N
0.720
e_gw1.3.2749.1
Cryphonectria parasitica
e_gw1.3.2749.1
N
0.720
ATEG_07413
Aspergillus terreus
CADATEAG00001505
N
0.720
pno1
Dictyostelium discoideum
DDB_G0287557
N
0.720
BGIOSIBCE009391
Oryza indica
BGIOSIBCE009391
N
0.720
mgf006621m
Mimulus guttatus
mgf006621m
N
0.720
GSTUMT00003923001
Tuber melanosporum
GSTUMT00003923001
N
0.720
PDK_20s1554761g001
Phoenix dactylifera
PDK_20s1554761g001
N
0.720
GID1.0042265
Dictyostelium purpureum
GID1.0042265
N
0.720
LmjF35.3540
Leishmania major
LmjF35.3540
N
0.720
LinJ35_V3.3590
Leishmania infantum
LinJ35_V3.3590
N
0.720
estExt_fgenesh2_pm.C_sca_70005
Lottia gigantea
estExt_fgenesh2_pm.C_sca_70005
N
0.720
fgenesh1_pg.C_scaffold_107000027
Daphnia pulex
fgenesh1_pg.C_scaffold_107000027
N
0.720
GA11169-RA
Drosophila pseudoobscura
FBgn0071224
N
0.706
GJ15820
Drosophila virilis
FBgn0203007
N
0.706
GH12628
Drosophila grimshawi
FBgn0120107
N
0.706
PDK_20s1552091g001
Phoenix dactylifera
PDK_20s1552091g001
N
0.700
AFUA_6G06430
Aspergillus fumigatus
CADAFUAG00001979
N
0.700
ANIA_05785
Aspergillus nidulans
CADANIAG00003265
N
0.700
fgenesh_newKGs_pm.139__21
Emiliania huxleyi
fgenesh_newKGs_pm.139__21
N
0.700
estExt_fgeneshHS_pm.C_280002
Naegleria gruberi
estExt_fgeneshHS_pm.C_280002
N
0.700
estExt_Genewise1.C_10689
Thielavia terrestris
estExt_Genewise1.C_10689
N
0.700
EDO07242.1
Babesia bovis
EDO07242.1
N
0.700
fgenesh1_kg.C_scaffold_5000048
Selaginella moellendorfii
fgenesh1_kg.C_scaffold_5000048
N
0.700
NFIA_052070
Neosartorya fischeri
CADNFIAG00004473
N
0.700
PMAA_046470
Penicillium marneffei
PMAA_046470
N
0.700
Medtr5g095530
Medicago truncatula
Medtr5g095530
N
0.700
LmxM34.3540
Leishmania mexicana
LmxM34.3540
N
0.700
AMSG_02733
Thecamonas trahens
AMSG_02733
N
0.700
PHATRDRAFT_9929
Phaeodactylum tricornutum
Phatr9929
N
0.700
MGG_05136
Magnaporthe oryzae
MGG_05136
N
0.700
e_gw1.226.39.1
Physcomitrella patens
e_gw1.226.39.1
N
0.700