FMR1 (Gasterosteus aculeatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSGACG00000018742 T18852_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.737
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.714
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000024785 KH 220 279
ENSGACP00000024785 KH 283 355

Links

Other KH family RBPs
Other Gasterosteus aculeatus RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FMR1 Oryzias latipes ENSORLG00000009094 I 0.887
fmr1 Danio rerio ENSDARG00000037433 I 0.842
FMR1 Canis familiaris ENSCAFG00000019085 I 0.836
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.815
AAI70204 Xenopus laevis AAI70204 I 0.813
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.813
AAI12953 Xenopus laevis AAI12953 I 0.813
Q2KHP9 Xenopus laevis Q2KHP9 I 0.813
P51113 Xenopus laevis P51113 I 0.806
AAC59683 Xenopus laevis AAC59683 I 0.806
FMR1 Takifugu rubripes ENSTRUG00000005362 N 0.788
FMR1 Tetraodon nigroviridis ENSTNIG00000010121 N 0.788
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.744
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.737
FXR1 Homo sapiens ENSG00000114416 D 0.737
FXR1 Echinops telfairi ENSETEG00000006891 I 0.737
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.737
FXR1 Canis familiaris ENSCAFG00000011582 I 0.737
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.737
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.737
FXR1 Equus caballus ENSECAG00000007560 I 0.737
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.737
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.737
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.737
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.737
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.737
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.737
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.737
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.737
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.737
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.737
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.737
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.729
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.729
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.729
Fxr1 Mus musculus ENSMUSG00000027680 I 0.729
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.729
FXR1 Sus scrofa ENSSSCG00000011769 I 0.729
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.722
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.722
FXR2 Canis familiaris ENSCAFG00000016685 I 0.722
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.714
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.714
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.714
FXR2 Bos taurus ENSBTAG00000005462 I 0.714
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.714
FXR2 Microcebus murinus ENSMICG00000014799 I 0.714
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.714
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.714
FXR2 Sus scrofa ENSSSCG00000017953 I 0.714
LOC100147323 Equus caballus ENSECAG00000007051 I 0.714
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.714
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.714
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.714
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.714
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.714
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.714
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.714
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.714
FXR2 Homo sapiens ENSG00000129245 D 0.714
FXR2 Felis catus ENSFCAG00000009620 I 0.714
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.714
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.714
Fxr2 Mus musculus ENSMUSG00000018765 I 0.714
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.714
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.714
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.707
FXR2 Echinops telfairi ENSETEG00000018613 I 0.707
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.707
AAH43638 Xenopus laevis AAH43638 I 0.707
FXR2 Procavia capensis ENSPCAG00000013184 I 0.707
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.707
P51115 Xenopus laevis P51115 I 0.707
AAH73457 Xenopus laevis AAH73457 I 0.707
AAY79166 Xenopus laevis AAY79166 I 0.707
AAY79165 Xenopus laevis AAY79165 I 0.707
AAI31885 Xenopus laevis AAI31885 I 0.707
FXR2 Oryzias latipes ENSORLG00000011571 I 0.701