FMR1 (Oryzias latipes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSORLG00000009094 T19285_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.756
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.756
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000011409 KH 220 279
ENSORLP00000011409 KH 283 352

Links

Other KH family RBPs
Other Oryzias latipes RBPs

88 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FMR1 Gasterosteus aculeatus ENSGACG00000018742 I 0.887
fmr1 Danio rerio ENSDARG00000037433 I 0.863
FMR1 Canis familiaris ENSCAFG00000019085 I 0.847
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.841
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.824
Q2KHP9 Xenopus laevis Q2KHP9 I 0.817
AAI12953 Xenopus laevis AAI12953 I 0.817
AAI70204 Xenopus laevis AAI70204 I 0.817
FMR1 Tetraodon nigroviridis ENSTNIG00000010121 N 0.813
AAC59683 Xenopus laevis AAC59683 I 0.809
P51113 Xenopus laevis P51113 I 0.809
FMR1 Takifugu rubripes ENSTRUG00000005362 N 0.791
FXR2 Canis familiaris ENSCAFG00000016685 I 0.763
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.763
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.763
LOC100147323 Equus caballus ENSECAG00000007051 I 0.756
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.756
FXR2 Bos taurus ENSBTAG00000005462 I 0.756
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.756
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.756
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.756
FXR1 Canis familiaris ENSCAFG00000011582 I 0.756
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.756
FXR2 Felis catus ENSFCAG00000009620 I 0.756
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.756
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.756
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.756
Fxr2 Mus musculus ENSMUSG00000018765 I 0.756
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.756
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.756
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.756
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.756
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.756
FXR1 Homo sapiens ENSG00000114416 D 0.756
FXR1 Echinops telfairi ENSETEG00000006891 I 0.756
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.756
FXR2 Homo sapiens ENSG00000129245 D 0.756
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.756
FXR2 Microcebus murinus ENSMICG00000014799 I 0.756
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.756
FXR1 Equus caballus ENSECAG00000007560 I 0.756
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.756
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.756
FXR2 Sus scrofa ENSSSCG00000017953 I 0.756
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.756
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.756
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.756
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.756
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.756
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.756
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.756
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.756
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.756
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.756
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.756
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.756
FXR1 Sus scrofa ENSSSCG00000011769 I 0.748
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.748
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.748
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.748
FXR2 Procavia capensis ENSPCAG00000013184 I 0.748
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.748
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.748
FXR2 Echinops telfairi ENSETEG00000018613 I 0.748
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.748
Fxr1 Mus musculus ENSMUSG00000027680 I 0.748
FXR2 Oryzias latipes ENSORLG00000011571 I 0.740
FXR2 Dasypus novemcinctus ENSDNOG00000001047 I 0.740
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.740
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.733
fxr1 Danio rerio ENSDARG00000022968 I 0.733
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.733
FXR2 Myotis lucifugus ENSMLUG00000003438 I 0.725
FXR1 Oryzias latipes ENSORLG00000011787 I 0.725
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.725
AAI31885 Xenopus laevis AAI31885 I 0.725
AAY79165 Xenopus laevis AAY79165 I 0.725
AAY79166 Xenopus laevis AAY79166 I 0.725
P51115 Xenopus laevis P51115 I 0.725
AAH73457 Xenopus laevis AAH73457 I 0.725
AAH43638 Xenopus laevis AAH43638 I 0.725
FXR2 Tetraodon nigroviridis ENSTNIG00000005118 I 0.725
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.725
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.725
AAC59682 Xenopus laevis AAC59682 I 0.718
FXR1 Gasterosteus aculeatus ENSGACG00000006052 I 0.718
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.710
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.710