CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPK
(
Ochotona princeps
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOPRG00000015723
T19268_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
hnRNPK
M026_0.6
Homo sapiens
CCAWMCC
RNAcompete
Ray et al.(2013)
RNCMPT00026
0.824
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000014365
KH
24
52
ELRILLQSKNAGAVIGKGGKNIKALRTDX
ENSOPRP00000014365
KH
126
189
ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKII
ENSOPRP00000014365
KH
369
431
TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
Links
Other
KH
family RBPs
Other
Ochotona princeps
RBPs
51 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPK
Procavia capensis
ENSPCAG00000016196
I
1.000
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000007554
I
0.949
HNRNPK
Callithrix jacchus
ENSCJAG00000003750
I
0.847
HNRNPK
Oryzias latipes
ENSORLG00000004704
I
0.830
HNRNPK
Gorilla gorilla
ENSGGOG00000015500
I
0.824
Ame_R002812
Ailuropoda melanoleuca
Ame_R002812
I
0.824
HNRNPK
Macropus eugenii
ENSMEUG00000006975
I
0.824
HNRNPK
Erinaceus europaeus
ENSEEUG00000014624
I
0.824
HNRPK_CHICK
Gallus gallus
ENSGALG00000014366
I
0.824
hnRNPK
Homo sapiens
ENSG00000165119
D
0.824
HNRNPK
Gallus gallus
ENSGALG00000012591
I
0.824
ENSMMUG00000018871
Macaca mulatta
ENSMMUG00000018871
I
0.824
HNRNPK
Choloepus hoffmanni
ENSCHOG00000010832
I
0.824
HNRNPK
Equus caballus
ENSECAG00000025104
I
0.824
HNRNPK
Tarsius syrichta
ENSTSYG00000001196
I
0.824
HNRNPK
Pan troglodytes
ENSPTRG00000021061
I
0.824
HNRNPK
Ornithorhynchus anatinus
ENSOANG00000014612
I
0.824
ENSMODG00000008402
Monodelphis domestica
ENSMODG00000008402
I
0.824
Hnrnpk
Rattus norvegicus
ENSRNOG00000019113
I
0.824
HNRNPK
Taeniopygia guttata
ENSTGUG00000003138
I
0.824
HNRNPK
Monodelphis domestica
ENSMODG00000018992
I
0.824
HNRNPK
Otolemur garnettii
ENSOGAG00000007478
I
0.824
HNRPK_RABIT
Oryctolagus cuniculus
ENSOCUG00000010364
I
0.824
ENSPPYG00000019327
Pongo pygmaeus
ENSPPYG00000019327
I
0.824
Hnrnpk
Mus musculus
ENSMUSG00000021546
I
0.824
HNRNPK
Anolis carolinensis
ENSACAG00000001479
I
0.819
HNRNPK
Tursiops truncatus
ENSTTRG00000016693
I
0.819
HNRNPK
Echinops telfairi
ENSETEG00000016294
I
0.819
HNRPK_BOVIN
Bos taurus
ENSBTAG00000021131
I
0.819
HNRNPK
Loxodonta africana
ENSLAFG00000026567
I
0.819
HNRNPK
Tupaia belangeri
ENSTBEG00000001289
I
0.814
Gm7964
Mus musculus
ENSMUSG00000063902
I
0.809
ENSTTRG00000004906
Tursiops truncatus
ENSTTRG00000004906
I
0.809
XM_533511.2
Canis familiaris
ENSCAFG00000001399
I
0.803
hnrpkl
Danio rerio
ENSDARG00000007034
I
0.803
AAH44711
Xenopus laevis
AAH44711
I
0.803
HNRNPK
Takifugu rubripes
ENSTRUG00000000535
I
0.798
AAB26047
Xenopus laevis
AAB26047
I
0.793
D3ZJL5_RAT
Rattus norvegicus
ENSRNOG00000029014
I
0.788
XM_855974.1
Canis familiaris
ENSCAFG00000017503
I
0.787
HNRNPK
Felis catus
ENSFCAG00000014862
I
0.777
ENSPPYG00000013626
Pongo pygmaeus
ENSPPYG00000013626
I
0.771
hnrnpk
Xenopus tropicalis
ENSXETG00000011722
I
0.771
HNRNPK
Pteropus vampyrus
ENSPVAG00000009078
I
0.771
HNRNPK
Gasterosteus aculeatus
ENSGACG00000007581
I
0.771
HNRNPK
Oryzias latipes
ENSORLG00000005161
I
0.766
HNRNPK
Takifugu rubripes
ENSTRUG00000010659
I
0.761
hnrnpk
Danio rerio
ENSDARG00000018914
I
0.761
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000006005
I
0.761
ENSOCUG00000025925
Oryctolagus cuniculus
ENSOCUG00000025925
I
0.755
ENSRNOG00000013016
Rattus norvegicus
ENSRNOG00000013016
I
0.723