CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPK
(
Oryzias latipes
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSORLG00000004704
T19278_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
hnRNPK
M026_0.6
Homo sapiens
CCAWMCC
RNAcompete
Ray et al.(2013)
RNCMPT00026
0.835
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000005921
KH
44
98
ELRVLLQSKNAGAVIGKGGKNIKALRTDLYCNHSTPTKTGPGDIDRILSVSAGID
ENSORLP00000005921
KH
149
212
ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVVECIKVI
ENSORLP00000005921
KH
398
460
TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
Links
Other
KH
family RBPs
Other
Oryzias latipes
RBPs
51 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
hnrpkl
Danio rerio
ENSDARG00000007034
I
0.851
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000007554
I
0.835
HNRNPK
Monodelphis domestica
ENSMODG00000018992
I
0.835
HNRNPK
Callithrix jacchus
ENSCJAG00000003750
I
0.835
HNRNPK
Choloepus hoffmanni
ENSCHOG00000010832
I
0.835
ENSMODG00000008402
Monodelphis domestica
ENSMODG00000008402
I
0.835
HNRNPK
Macropus eugenii
ENSMEUG00000006975
I
0.835
HNRNPK
Equus caballus
ENSECAG00000025104
I
0.835
HNRPK_CHICK
Gallus gallus
ENSGALG00000014366
I
0.835
HNRNPK
Gorilla gorilla
ENSGGOG00000015500
I
0.835
HNRNPK
Gallus gallus
ENSGALG00000012591
I
0.835
hnRNPK
Homo sapiens
ENSG00000165119
D
0.835
HNRNPK
Erinaceus europaeus
ENSEEUG00000014624
I
0.835
ENSMMUG00000018871
Macaca mulatta
ENSMMUG00000018871
I
0.835
HNRNPK
Tarsius syrichta
ENSTSYG00000001196
I
0.835
Ame_R002812
Ailuropoda melanoleuca
Ame_R002812
I
0.835
HNRPK_RABIT
Oryctolagus cuniculus
ENSOCUG00000010364
I
0.835
Hnrnpk
Rattus norvegicus
ENSRNOG00000019113
I
0.835
HNRNPK
Otolemur garnettii
ENSOGAG00000007478
I
0.835
HNRNPK
Pan troglodytes
ENSPTRG00000021061
I
0.835
ENSPPYG00000019327
Pongo pygmaeus
ENSPPYG00000019327
I
0.835
HNRNPK
Ornithorhynchus anatinus
ENSOANG00000014612
I
0.835
HNRNPK
Taeniopygia guttata
ENSTGUG00000003138
I
0.835
Hnrnpk
Mus musculus
ENSMUSG00000021546
I
0.835
HNRNPK
Takifugu rubripes
ENSTRUG00000000535
I
0.835
HNRPK_BOVIN
Bos taurus
ENSBTAG00000021131
I
0.830
HNRNPK
Echinops telfairi
ENSETEG00000016294
I
0.830
HNRNPK
Tursiops truncatus
ENSTTRG00000016693
I
0.830
HNRNPK
Anolis carolinensis
ENSACAG00000001479
I
0.830
HNRNPK
Loxodonta africana
ENSLAFG00000026567
I
0.830
HNRNPK
Ochotona princeps
ENSOPRG00000015723
I
0.830
HNRNPK
Procavia capensis
ENSPCAG00000016196
I
0.830
Gm7964
Mus musculus
ENSMUSG00000063902
I
0.824
AAH44711
Xenopus laevis
AAH44711
I
0.819
ENSTTRG00000004906
Tursiops truncatus
ENSTTRG00000004906
I
0.819
HNRNPK
Tupaia belangeri
ENSTBEG00000001289
I
0.819
AAB26047
Xenopus laevis
AAB26047
I
0.814
XM_533511.2
Canis familiaris
ENSCAFG00000001399
I
0.814
HNRNPK
Gasterosteus aculeatus
ENSGACG00000007581
I
0.809
HNRNPK
Oryzias latipes
ENSORLG00000005161
I
0.803
XM_855974.1
Canis familiaris
ENSCAFG00000017503
I
0.798
HNRNPK
Takifugu rubripes
ENSTRUG00000010659
I
0.798
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000006005
I
0.798
hnrnpk
Danio rerio
ENSDARG00000018914
I
0.793
ENSPPYG00000013626
Pongo pygmaeus
ENSPPYG00000013626
I
0.787
hnrnpk
Xenopus tropicalis
ENSXETG00000011722
I
0.787
HNRNPK
Felis catus
ENSFCAG00000014862
I
0.787
HNRNPK
Pteropus vampyrus
ENSPVAG00000009078
I
0.787
D3ZJL5_RAT
Rattus norvegicus
ENSRNOG00000029014
I
0.787
ENSOCUG00000025925
Oryctolagus cuniculus
ENSOCUG00000025925
I
0.766
ENSRNOG00000013016
Rattus norvegicus
ENSRNOG00000013016
I
0.734