AC218972.3_FG007 (Zea mays)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 AC218972.3_FG007 T21352_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AC218972.3_FGP007 KH 140 224

Links

Other KH family RBPs
Other Zea mays RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB03G038070 Sorghum bicolor Sb03g038070 N 0.976
GRMZM2G093006 Zea mays GRMZM2G093006 N 0.965
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.882
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.871
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.871
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.859
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.859
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.824
SB09G023640 Sorghum bicolor Sb09g023640 N 0.812
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.776
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.770
BGIOSIBCE004076 Oryza indica BGIOSIBCE004076 N 0.763
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.753
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.753
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.741
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.741
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.741
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.729
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.718
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.718
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.718
ppa009701m Prunus persica ppa009701m N 0.718
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.706
PK01720.1 Cannabis sativa PK01720.1 N 0.706
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.706
MDP0000665847 Malus x domestica MDP0000665847 N 0.706
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.706
cassava15324.m1 Manihot esculenta cassava15324.m1 N 0.706
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.706
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.706
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.706
cassava13308.valid.m1 Manihot esculenta cassava13308.valid.m1 N 0.706
cassava13309.valid.m1 Manihot esculenta cassava13309.valid.m1 N 0.706
MDP0000186494 Malus x domestica MDP0000186494 N 0.706