WUBG_10715 (Wuchereria bancrofti)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 WUBG_10715 T31578_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
snf
M136_0.6 		Drosophila melanogaster UWGCAC RNAcompete
Ray et al.(2013)
RNCMPT00145 		0.732
SNRPA
M348_0.6 		Homo sapiens AGGAGAU SELEX
Cook et al.(2011)
949_10094314 		0.710
SNRPA
M347_0.6 		Homo sapiens GAGCAGUAGKS SELEX
Cook et al.(2011)
948_10094314 		0.710
SNRPA
M346_0.6 		Homo sapiens GGGUAUGCUG SELEX
Cook et al.(2011)
947_10094314 		0.710
SNRPA
M345_0.6 		Homo sapiens GWUWCCUGCUA SELEX
Cook et al.(2011)
946_10094314 		0.710
SNRPA
M319_0.6 		Homo sapiens AUUGCAC SELEX
Cook et al.(2011)
663_1717938 		0.710
SNRPA
M318_0.6 		Homo sapiens AUUGCAC SELEX
Cook et al.(2011)
662_1717938 		0.710
SNRPA
M317_0.6 		Homo sapiens AUUGCAC SELEX
Cook et al.(2011)
661_1717938 		0.710
SNRPA
M069_0.6 		Homo sapiens WUGCACR RNAcompete
Ray et al.(2013)
RNCMPT00071 		0.710
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
WUBG_10715T0 RRM 27 98
WUBG_10715T0 RRM 169 233

Links

Other RRM family RBPs
Other Wuchereria bancrofti RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOAG_02293 Loa loa LOAG_02293 I 1.000
Bm1_37765 Brugia malayi Bm1_37765 I 0.993
Ppa-rnp-2 Pristionchus pacificus PPA13583 N 0.750
e_gw1.38.145.1 Lottia gigantea e_gw1.38.145.1 I 0.746
SPA_estExt_Genewise1Plus.C_890021 Daphnia pulex SPA_estExt_Genewise1Plus.C_890021 I 0.745
AAEL014167 Aedes aegypti AAEL014167 I 0.739
GH24608 Drosophila grimshawi FBgn0132064 I 0.739
Minc06447 Meloidogyne incognita Minc06447 N 0.739
AAEL002980 Aedes aegypti AAEL002980 I 0.739
snf Drosophila mojavensis FBgn0069598 I 0.739
GK25839 Drosophila willistoni FBgn0227798 I 0.739
Minc08423 Meloidogyne incognita Minc08423 N 0.739
GJ16850 Drosophila virilis FBgn0204029 I 0.739
e_gw1.1.761.1 Trichoplax adhaerens e_gw1.1.761.1 I 0.737
estExt_fgenesh2_pg.C_1420076 Branchiostoma floridae estExt_fgenesh2_pg.C_1420076 I 0.737
estExt_fgenesh2_pg.C_3980007 Branchiostoma floridae estExt_fgenesh2_pg.C_3980007 I 0.737
estExt_Genewise1Plus.C_1950032 Capitella teleta estExt_Genewise1Plus.C_1950032 I 0.737
nasonia_NCBI_hmm682213 Nasonia vitripennis nasonia_NCBI_hmm682213 I 0.734
GL14287 Drosophila persimilis FBgn0151892 I 0.732
GM12396 Drosophila sechellia FBgn0167333 I 0.732
AGAP011637 Anopheles gambiae AGAP011637 I 0.732
snf Drosophila melanogaster FBgn0003449 D 0.732
CPIJ019134 Culex quinquefasciatus CPIJ019134 I 0.732
GF21334 Drosophila ananassae FBgn0098336 I 0.732
GA18235-RA Drosophila pseudoobscura FBgn0078242 I 0.732
GG18748 Drosophila erecta FBgn0110957 I 0.732
GE16390 Drosophila yakuba FBgn0233919 I 0.732
BGIBMGA012118 Bombyx mori BGIBMGA012118 I 0.732
CpipJ_CPIJ019134 Culex pipiens CpipJ_CPIJ019134 I 0.732
AAH44979 Xenopus laevis AAH44979 I 0.725
CAA41021 Xenopus laevis CAA41021 I 0.725
P45429 Xenopus laevis P45429 I 0.725
amel4_ncbi_hmm2739 Apis mellifera amel4_ncbi_hmm2739 I 0.719
ENSCING00000009501 Ciona intestinalis ENSCING00000009501 I 0.717
SNRPA Monodelphis domestica ENSMODG00000007912 I 0.717
SNRPA Procavia capensis ENSPCAG00000012325 I 0.717
Ame_R012098 Ailuropoda melanoleuca Ame_R012098 I 0.710
SNRPA Sus scrofa ENSSSCG00000002998 I 0.710
ENSDORG00000006711 Dipodomys ordii ENSDORG00000006711 I 0.710
LOC100068274 Equus caballus ENSECAG00000013141 I 0.710
SNRPA Felis catus ENSFCAG00000016209 I 0.710
SNRPA Homo sapiens ENSG00000077312 D 0.710
snrpa Danio rerio ENSDARG00000018890 I 0.710
SNRPA Cavia porcellus ENSCPOG00000010875 I 0.710
DGIL_AUG5s14106g2t1 Acyrtosiphon pisum DGIL_AUG5s14106g2t1 I 0.710
SNRPA_BOVIN Bos taurus ENSBTAG00000009077 I 0.710
SNRPA Canis familiaris ENSCAFG00000005091 I 0.710
SNRPA Tupaia belangeri ENSTBEG00000012717 I 0.710
SNRPA Gorilla gorilla ENSGGOG00000001190 I 0.710
SNRPA Myotis lucifugus ENSMLUG00000000219 I 0.710
SNRPA Pteropus vampyrus ENSPVAG00000001494 I 0.710
ENSPPYG00000010002 Pongo pygmaeus ENSPPYG00000010002 I 0.710
SNRPA Ochotona princeps ENSOPRG00000002364 I 0.710
Snrpa Rattus norvegicus ENSRNOG00000001501 I 0.710
SNRPA Macaca mulatta ENSMMUG00000022024 I 0.710
SNRPA Otolemur garnettii ENSOGAG00000002864 I 0.710
SNRPA Pan troglodytes ENSPTRG00000011007 I 0.710
e_gw.11.168.1 Nematostella vectensis e_gw.11.168.1 I 0.708
SNRPA Oryzias latipes ENSORLG00000006536 I 0.708
SNRPA Erinaceus europaeus ENSEEUG00000015149 I 0.703
LOC100410790 Callithrix jacchus ENSCJAG00000021962 I 0.703