mgf008267m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf008267m T53656_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf008267m RRM 106 176
mgf008267m RRM 200 270

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.824
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.824
PK05280.1 Cannabis sativa PK05280.1 N 0.824
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.817
30147.m013835 Ricinus communis 30147.m013835 N 0.810
ppa009286m Prunus persica ppa009286m N 0.810
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.810
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.803
ppa008913m Prunus persica ppa008913m N 0.803
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.803
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.796
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.796
MDP0000919119 Malus x domestica MDP0000919119 N 0.796
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.796
MDP0000218595 Malus x domestica MDP0000218595 N 0.796
SB02G011330 Sorghum bicolor Sb02g011330 N 0.789
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.789
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.789
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.782
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.782
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.782
mgf001484m Mimulus guttatus mgf001484m N 0.775
MDP0000528470 Malus x domestica MDP0000528470 N 0.768
PK28733.1 Cannabis sativa PK28733.1 N 0.768
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.768
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.761
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.761
mgf009747m Mimulus guttatus mgf009747m N 0.761
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.754
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.746
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.739
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.732
MDP0000299693 Malus x domestica MDP0000299693 N 0.732
MDP0000296631 Malus x domestica MDP0000296631 N 0.732
SB07G024400 Sorghum bicolor Sb07g024400 N 0.718
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.718
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.718
BRADI3G42700 Brachypodium distachyon BRADI3G42700 N 0.711