BRADI5G01430 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI5G01430 T33301_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G01430.1 RRM 4 64
BRADI5G01430.1 RRM 99 162
BRADI5G01430.2 RRM 4 64
BRADI5G01430.2 RRM 99 162

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE013939 Oryza indica BGIOSIBCE013939 N 0.936
LOC_Os04g02870 Oryza sativa LOC_Os04g02870 N 0.936
SB06G001100 Sorghum bicolor Sb06g001100 N 0.904
GRMZM2G021223 Zea mays GRMZM2G021223 N 0.888
GRMZM2G052166 Zea mays GRMZM2G052166 N 0.880
Cucsa.259460 Cucumis sativus Cucsa.259460 N 0.768
MDP0000263938 Malus x domestica MDP0000263938 N 0.744
MDP0000387508 Malus x domestica MDP0000387508 N 0.744
Medtr8g029490 Medicago truncatula Medtr8g029490 N 0.738
XM_002882032.1 Arabidopsis lyrata fgenesh2_kg.4__2884__AT2G46610.1 N 0.728
Glyma07g05900.1 Glycine max Glyma07g05900.1 N 0.722
ppa008137m Prunus persica ppa008137m N 0.720
Glyma16g02500.1 Glycine max Glyma16g02500.1 N 0.714
cassava43625.valid.m1 Manihot esculenta cassava43625.valid.m1 N 0.712
cassava43624.valid.m1 Manihot esculenta cassava43624.valid.m1 N 0.712
RS31a Arabidopsis thaliana AT2G46610-TAIR-G N 0.712
29742.m001371 Ricinus communis 29742.m001371 N 0.712
B9I911_POPTR Populus trichocarpa POPTR_0014s09730 N 0.712
XM_002878371.1 Arabidopsis lyrata fgenesh2_kg.5__2682__AT3G61860.1 N 0.704
B9GR47_POPTR Populus trichocarpa POPTR_0002s17560 N 0.704
BGIOSIBCE005422 Oryza indica BGIOSIBCE005422 N 0.701
LOC_Os02g03040 Oryza sativa LOC_Os02g03040 N 0.701
mgf011722m Mimulus guttatus mgf011722m N 0.701