ppa008137m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa008137m T58394_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa008137m RRM 4 64
ppa008137m RRM 95 158

Links

Other RRM family RBPs
Other Prunus persica RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000263938 Malus x domestica MDP0000263938 N 0.904
MDP0000387508 Malus x domestica MDP0000387508 N 0.904
Cucsa.259460 Cucumis sativus Cucsa.259460 N 0.872
PK15848.1 Cannabis sativa PK15848.1 N 0.856
cassava43624.valid.m1 Manihot esculenta cassava43624.valid.m1 N 0.848
cassava43625.valid.m1 Manihot esculenta cassava43625.valid.m1 N 0.848
mgf011632m Mimulus guttatus mgf011632m N 0.841
RS31 Arabidopsis thaliana AT3G61860-TAIR-G N 0.840
29742.m001371 Ricinus communis 29742.m001371 N 0.832
XM_002878371.1 Arabidopsis lyrata fgenesh2_kg.5__2682__AT3G61860.1 N 0.832
B9GR47_POPTR Populus trichocarpa POPTR_0002s17560 N 0.824
XM_002882032.1 Arabidopsis lyrata fgenesh2_kg.4__2884__AT2G46610.1 N 0.824
B9I911_POPTR Populus trichocarpa POPTR_0014s09730 N 0.816
Glyma16g02500.1 Glycine max Glyma16g02500.1 N 0.810
Glyma07g05900.1 Glycine max Glyma07g05900.1 N 0.810
Medtr8g029490 Medicago truncatula Medtr8g029490 N 0.794
RS31a Arabidopsis thaliana AT2G46610-TAIR-G N 0.784
LOC_Os04g02870 Oryza sativa LOC_Os04g02870 N 0.744
BGIOSIBCE013939 Oryza indica BGIOSIBCE013939 N 0.744
BRADI5G01430 Brachypodium distachyon BRADI5G01430 N 0.720
SB01G049590 Sorghum bicolor Sb01g049590 N 0.714
e_gw1.5.1267.1 Selaginella moellendorfii e_gw1.5.1267.1 N 0.714
BRADI1G77520 Brachypodium distachyon BRADI1G77520 N 0.706
PDK_20s1467051g001 Phoenix dactylifera PDK_20s1467051g001 N 0.701