RS31a (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT2G46610-TAIR-G T32714_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT2G46610.1-P RRM 4 64
AT2G46610.1-P RRM 97 160
AT2G46610.2-P RRM 4 38
AT2G46610.2-P RRM 71 134

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002882032.1 Arabidopsis lyrata fgenesh2_kg.4__2884__AT2G46610.1 N 0.920
Cucsa.259460 Cucumis sativus Cucsa.259460 N 0.816
XM_002878371.1 Arabidopsis lyrata fgenesh2_kg.5__2682__AT3G61860.1 N 0.784
ppa008137m Prunus persica ppa008137m N 0.784
RS31 Arabidopsis thaliana AT3G61860-TAIR-G N 0.784
PK15848.1 Cannabis sativa PK15848.1 N 0.776
mgf011632m Mimulus guttatus mgf011632m N 0.762
cassava43625.valid.m1 Manihot esculenta cassava43625.valid.m1 N 0.760
cassava43624.valid.m1 Manihot esculenta cassava43624.valid.m1 N 0.760
GSVIVG00027193001 Vitis vinifera GSVIVG00027193001 N 0.755
MDP0000263938 Malus x domestica MDP0000263938 N 0.752
MDP0000387508 Malus x domestica MDP0000387508 N 0.752
B9GR47_POPTR Populus trichocarpa POPTR_0002s17560 N 0.744
29742.m001371 Ricinus communis 29742.m001371 N 0.744
mgf003788m Mimulus guttatus mgf003788m N 0.740
Glyma16g02500.1 Glycine max Glyma16g02500.1 N 0.730
Glyma07g05900.1 Glycine max Glyma07g05900.1 N 0.730
B9I911_POPTR Populus trichocarpa POPTR_0014s09730 N 0.728
Medtr8g029490 Medicago truncatula Medtr8g029490 N 0.714
BGIOSIBCE013939 Oryza indica BGIOSIBCE013939 N 0.712
LOC_Os04g02870 Oryza sativa LOC_Os04g02870 N 0.712
BRADI5G01430 Brachypodium distachyon BRADI5G01430 N 0.712