BGIOSIBCE013939 (Oryza indica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIOSIBCE013939 T32959_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE013939 RRM 4 64
BGIOSIBCE013939 RRM 96 159

Links

Other RRM family RBPs
Other Oryza indica RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os04g02870 Oryza sativa LOC_Os04g02870 N 1.000
BRADI5G01430 Brachypodium distachyon BRADI5G01430 N 0.936
SB06G001100 Sorghum bicolor Sb06g001100 N 0.880
GRMZM2G021223 Zea mays GRMZM2G021223 N 0.864
GRMZM2G052166 Zea mays GRMZM2G052166 N 0.856
Cucsa.259460 Cucumis sativus Cucsa.259460 N 0.776
MDP0000387508 Malus x domestica MDP0000387508 N 0.760
MDP0000263938 Malus x domestica MDP0000263938 N 0.760
Medtr8g029490 Medicago truncatula Medtr8g029490 N 0.754
Glyma07g05900.1 Glycine max Glyma07g05900.1 N 0.754
Glyma16g02500.1 Glycine max Glyma16g02500.1 N 0.746
ppa008137m Prunus persica ppa008137m N 0.744
RS31 Arabidopsis thaliana AT3G61860-TAIR-G N 0.720
XM_002882032.1 Arabidopsis lyrata fgenesh2_kg.4__2884__AT2G46610.1 N 0.720
cassava43625.valid.m1 Manihot esculenta cassava43625.valid.m1 N 0.720
29742.m001371 Ricinus communis 29742.m001371 N 0.720
cassava43624.valid.m1 Manihot esculenta cassava43624.valid.m1 N 0.720
mgf011632m Mimulus guttatus mgf011632m N 0.714
RS31a Arabidopsis thaliana AT2G46610-TAIR-G N 0.712
B9GR47_POPTR Populus trichocarpa POPTR_0002s17560 N 0.712
XM_002878371.1 Arabidopsis lyrata fgenesh2_kg.5__2682__AT3G61860.1 N 0.712
B9I911_POPTR Populus trichocarpa POPTR_0014s09730 N 0.712
PK15848.1 Cannabis sativa PK15848.1 N 0.704
BGIOSIBCE005422 Oryza indica BGIOSIBCE005422 N 0.701
LOC_Os02g03040 Oryza sativa LOC_Os02g03040 N 0.701