SYNCRIP (Dasypus novemcinctus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDNOG00000018345 T36376_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSXETG00000018075
M236_0.6 		Xenopus tropicalis MAAAWWD RNAcompete
Ray et al.(2013)
RNCMPT00281 		0.770
ENSXETG00000007102
M243_0.6 		Xenopus tropicalis MAAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00289 		0.725
ENSGALG00000000814
M242_0.6 		Gallus gallus MMAAAWY RNAcompete
Ray et al.(2013)
RNCMPT00288 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDNOP00000014240 RRM 164 226
ENSDNOP00000014240 RRM 270 311
ENSDNOP00000014240 RRM 339 398

Links

Other RRM family RBPs
Other Dasypus novemcinctus RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Syncrip Dipodomys ordii ENSDORG00000005217 I 0.959
SYNCRIP Otolemur garnettii ENSOGAG00000001721 I 0.959
HNRNPR Procavia capensis ENSPCAG00000010462 I 0.836
HNRNPR Macropus eugenii ENSMEUG00000003769 I 0.830
SYNCRIP Pteropus vampyrus ENSPVAG00000011888 I 0.790
SYNCRIP Sorex araneus ENSSARG00000005967 I 0.790
XR_022081.1 Pan troglodytes ENSPTRG00000018393 I 0.790
SYNCRIP Echinops telfairi ENSETEG00000020109 I 0.790
XM_001366708.1 Monodelphis domestica ENSMODG00000018345 I 0.790
SYNCRIP Oryctolagus cuniculus ENSOCUG00000000601 I 0.790
SYNCRIP Sus scrofa ENSSSCG00000004294 I 0.790
SYNCRIP Tarsius syrichta ENSTSYG00000013305 I 0.790
SYNCRIP Callithrix jacchus ENSCJAG00000015352 I 0.790
SYNCRIP Cavia porcellus ENSCPOG00000012415 I 0.790
SYNCRIP Canis familiaris ENSCAFG00000003024 I 0.790
A7E355_BOVIN Bos taurus ENSBTAG00000006672 I 0.790
SYNCRIP Vicugna pacos ENSVPAG00000001061 I 0.790
Ame_R011496 Ailuropoda melanoleuca Ame_R011496 I 0.790
XM_001362737.1 Monodelphis domestica ENSMODG00000000609 I 0.790
ENSPPYG00000016819 Pongo pygmaeus ENSPPYG00000016819 I 0.790
SYNCRIP Loxodonta africana ENSLAFG00000018172 I 0.790
Q5ZLH7_CHICK Gallus gallus ENSGALG00000015830 I 0.790
SYNCRIP Homo sapiens ENSG00000135316 I 0.790
SYNCRIP Meleagris gallopavo ENSMGAG00000013690 I 0.790
SYNCRIP Macaca mulatta ENSMMUG00000012575 I 0.790
SYNCRIP Gorilla gorilla ENSGGOG00000012898 I 0.790
SYNCRIP Microcebus murinus ENSMICG00000007192 I 0.790
Syncrip Rattus norvegicus ENSRNOG00000000204 I 0.785
SYNCRIP Ornithorhynchus anatinus ENSOANG00000010099 I 0.785
Syncrip Mus musculus ENSMUSG00000032423 I 0.785
SYNCRIP Myotis lucifugus ENSMLUG00000006919 I 0.780
ENSXETG00000018075 Xenopus tropicalis ENSXETG00000018075 D 0.770
AAH70529 Xenopus laevis AAH70529 I 0.770
SYNCRIP Anolis carolinensis ENSACAG00000015234 I 0.770
SYNCRIP Gasterosteus aculeatus ENSGACG00000011665 I 0.740
SYNCRIP Gasterosteus aculeatus ENSGACG00000009124 I 0.738
syncrip Danio rerio ENSDARG00000040184 I 0.735
SYNCRIP Oryzias latipes ENSORLG00000009190 I 0.730
syncripl Danio rerio ENSDARG00000026723 I 0.728
ENSXETG00000007102 Xenopus tropicalis ENSXETG00000007102 D 0.725
AAI61702 Xenopus laevis AAI61702 I 0.725
SYNCRIP Takifugu rubripes ENSTRUG00000005365 I 0.723
SYNCRIP Tetraodon nigroviridis ENSTNIG00000017299 I 0.723
SYNCRIP Takifugu rubripes ENSTRUG00000014766 I 0.718
SYNCRIP Tetraodon nigroviridis ENSTNIG00000002821 I 0.718
SYNCRIP Oryzias latipes ENSORLG00000014840 I 0.716
A3KMV6_BOVIN Bos taurus ENSBTAG00000016578 I 0.705
HNRNPR Gorilla gorilla ENSGGOG00000013250 I 0.705
HNRNPR Callithrix jacchus ENSCJAG00000005512 I 0.705
ENSCPOG00000009653 Cavia porcellus ENSCPOG00000009653 I 0.705
HNRNPR Macaca mulatta ENSMMUG00000010970 I 0.705
Hnrnpr Mus musculus ENSMUSG00000066037 I 0.705
HNRNPR Equus caballus ENSECAG00000013733 I 0.705
HNRNPR Anolis carolinensis ENSACAG00000017593 I 0.705
Hnrnpr Rattus norvegicus ENSRNOG00000011910 I 0.705
HNRNPR Loxodonta africana ENSLAFG00000012793 I 0.705
ENSPPYG00000001744 Pongo pygmaeus ENSPPYG00000001744 I 0.705
Ame_R001024 Ailuropoda melanoleuca Ame_R001024 I 0.705
HNRNPR Homo sapiens ENSG00000125944 I 0.705
HNRNPR Monodelphis domestica ENSMODG00000016144 I 0.700
HNRNPR Taeniopygia guttata ENSTGUG00000000880 I 0.700
ENSGALG00000000814 Gallus gallus ENSGALG00000000814 D 0.700
HNRNPR Meleagris gallopavo ENSMGAG00000001000 I 0.700
HNRNPR Ornithorhynchus anatinus ENSOANG00000003961 I 0.700