HNRNPR (Monodelphis domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMODG00000016144 T39178_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000000814
M242_0.6 		Gallus gallus MMAAAWY RNAcompete
Ray et al.(2013)
RNCMPT00288 		0.980
ENSXETG00000007102
M243_0.6 		Xenopus tropicalis MAAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00289 		0.915
ENSXETG00000018075
M236_0.6 		Xenopus tropicalis MAAAWWD RNAcompete
Ray et al.(2013)
RNCMPT00281 		0.846
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000020165 RRM 167 235
ENSMODP00000020165 RRM 248 318
ENSMODP00000020165 RRM 346 408
ENSMODP00000032419 RRM 129 197
ENSMODP00000032419 RRM 210 277
ENSMODP00000032419 RRM 305 367
ENSMODP00000032421 RRM 66 134
ENSMODP00000032421 RRM 147 217
ENSMODP00000032421 RRM 245 307

Links

Other RRM family RBPs
Other Monodelphis domestica RBPs

84 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPR Homo sapiens ENSG00000125944 I 0.995
HNRNPR Sorex araneus ENSSARG00000001732 I 0.995
HNRNPR Pteropus vampyrus ENSPVAG00000014804 I 0.995
HNRNPR Pan troglodytes ENSPTRG00000000324 I 0.995
HNRNPR Tupaia belangeri ENSTBEG00000002251 I 0.995
HNRNPR Callithrix jacchus ENSCJAG00000005512 I 0.995
HNRNPR Choloepus hoffmanni ENSCHOG00000005090 I 0.995
Ame_R001024 Ailuropoda melanoleuca Ame_R001024 I 0.995
HNRNPR Equus caballus ENSECAG00000013733 I 0.995
HNRNPR Loxodonta africana ENSLAFG00000012793 I 0.995
ENSPPYG00000001744 Pongo pygmaeus ENSPPYG00000001744 I 0.995
Hnrnpr Rattus norvegicus ENSRNOG00000011910 I 0.995
HNRNPR Gorilla gorilla ENSGGOG00000013250 I 0.995
Hnrnpr Mus musculus ENSMUSG00000066037 I 0.995
A3KMV6_BOVIN Bos taurus ENSBTAG00000016578 I 0.995
HNRNPR Macaca mulatta ENSMMUG00000010970 I 0.995
ENSCPOG00000009653 Cavia porcellus ENSCPOG00000009653 I 0.995
HNRNPR Oryctolagus cuniculus ENSOCUG00000006686 I 0.985
HNRNPR Canis familiaris ENSCAFG00000013308 I 0.985
HNRNPR Anolis carolinensis ENSACAG00000017593 I 0.985
HNRNPR Ornithorhynchus anatinus ENSOANG00000003961 I 0.985
HNRNPR Otolemur garnettii ENSOGAG00000009179 I 0.980
HNRNPR Taeniopygia guttata ENSTGUG00000000880 I 0.980
ENSGALG00000000814 Gallus gallus ENSGALG00000000814 D 0.980
HNRNPR Meleagris gallopavo ENSMGAG00000001000 I 0.980
HNRNPR Erinaceus europaeus ENSEEUG00000010120 I 0.951
HNRNPR Myotis lucifugus ENSMLUG00000007582 I 0.931
HNRNPR Tursiops truncatus ENSTTRG00000007752 I 0.916
ENSXETG00000007102 Xenopus tropicalis ENSXETG00000007102 D 0.915
AAI61702 Xenopus laevis AAI61702 I 0.905
ENSCJAG00000013031 Callithrix jacchus ENSCJAG00000013031 I 0.877
HNRNPR Gasterosteus aculeatus ENSGACG00000003202 I 0.861
HNRNPR Ochotona princeps ENSOPRG00000014561 I 0.858
HNRNPR Tetraodon nigroviridis ENSTNIG00000017576 I 0.856
HNRNPR Takifugu rubripes ENSTRUG00000008817 I 0.852
AAH70529 Xenopus laevis AAH70529 I 0.847
Syncrip Mus musculus ENSMUSG00000032423 I 0.847
SYNCRIP Oryzias latipes ENSORLG00000009190 I 0.847
Syncrip Rattus norvegicus ENSRNOG00000000204 I 0.847
HNRNPR Oryzias latipes ENSORLG00000002515 I 0.844
SYNCRIP Macaca mulatta ENSMMUG00000012575 I 0.842
SYNCRIP Callithrix jacchus ENSCJAG00000015352 I 0.842
SYNCRIP Gasterosteus aculeatus ENSGACG00000011665 I 0.842
XM_001362737.1 Monodelphis domestica ENSMODG00000000609 I 0.842
SYNCRIP Homo sapiens ENSG00000135316 I 0.842
SYNCRIP Echinops telfairi ENSETEG00000020109 I 0.842
SYNCRIP Cavia porcellus ENSCPOG00000012415 I 0.842
SYNCRIP Myotis lucifugus ENSMLUG00000006919 I 0.842
SYNCRIP Loxodonta africana ENSLAFG00000018172 I 0.842
syncrip Danio rerio ENSDARG00000040184 I 0.842
SYNCRIP Microcebus murinus ENSMICG00000007192 I 0.842
SYNCRIP Gorilla gorilla ENSGGOG00000012898 I 0.842
Ame_R011496 Ailuropoda melanoleuca Ame_R011496 I 0.842
SYNCRIP Pteropus vampyrus ENSPVAG00000011888 I 0.842
SYNCRIP Tarsius syrichta ENSTSYG00000013305 I 0.842
ENSPPYG00000016819 Pongo pygmaeus ENSPPYG00000016819 I 0.842
SYNCRIP Canis familiaris ENSCAFG00000003024 I 0.842
SYNCRIP Sorex araneus ENSSARG00000005967 I 0.842
SYNCRIP Sus scrofa ENSSSCG00000004294 I 0.842
SYNCRIP Vicugna pacos ENSVPAG00000001061 I 0.842
XR_022081.1 Pan troglodytes ENSPTRG00000018393 I 0.842
A7E355_BOVIN Bos taurus ENSBTAG00000006672 I 0.842
SYNCRIP Oryctolagus cuniculus ENSOCUG00000000601 I 0.842
XM_001366708.1 Monodelphis domestica ENSMODG00000018345 I 0.842
Q5ZLH7_CHICK Gallus gallus ENSGALG00000015830 I 0.837
ENSXETG00000018075 Xenopus tropicalis ENSXETG00000018075 D 0.837
SYNCRIP Meleagris gallopavo ENSMGAG00000013690 I 0.837
HNRNPR Macropus eugenii ENSMEUG00000003769 I 0.835
SYNCRIP Gasterosteus aculeatus ENSGACG00000009124 I 0.833
SYNCRIP Takifugu rubripes ENSTRUG00000014766 I 0.833
SYNCRIP Ornithorhynchus anatinus ENSOANG00000010099 I 0.832
SYNCRIP Anolis carolinensis ENSACAG00000015234 I 0.832
HNRNPR Procavia capensis ENSPCAG00000010462 I 0.825
SYNCRIP Tetraodon nigroviridis ENSTNIG00000002821 I 0.823
SYNCRIP Oryzias latipes ENSORLG00000014840 I 0.818
syncripl Danio rerio ENSDARG00000026723 I 0.813
SYNCRIP Takifugu rubripes ENSTRUG00000005365 I 0.813
SYNCRIP Tetraodon nigroviridis ENSTNIG00000017299 I 0.813
ENSRNOG00000033356 Rattus norvegicus ENSRNOG00000033356 I 0.792
HNRNPR Felis catus ENSFCAG00000019123 I 0.739
Syncrip Dipodomys ordii ENSDORG00000005217 I 0.720
SYNCRIP Otolemur garnettii ENSOGAG00000001721 I 0.720
SYNCRIP Dasypus novemcinctus ENSDNOG00000018345 I 0.700