HNRNPR (Anolis carolinensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSACAG00000017593 T34752_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000000814
M242_0.6 		Gallus gallus MMAAAWY RNAcompete
Ray et al.(2013)
RNCMPT00288 		0.985
ENSXETG00000007102
M243_0.6 		Xenopus tropicalis MAAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00289 		0.920
ENSXETG00000018075
M236_0.6 		Xenopus tropicalis MAAAWWD RNAcompete
Ray et al.(2013)
RNCMPT00281 		0.856
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000017344 RRM 167 235
ENSACAP00000017344 RRM 248 315
ENSACAP00000017344 RRM 343 405

Links

Other RRM family RBPs
Other Anolis carolinensis RBPs

84 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000001744 Pongo pygmaeus ENSPPYG00000001744 I 0.990
HNRNPR Homo sapiens ENSG00000125944 I 0.990
Hnrnpr Rattus norvegicus ENSRNOG00000011910 I 0.990
Hnrnpr Mus musculus ENSMUSG00000066037 I 0.990
HNRNPR Gorilla gorilla ENSGGOG00000013250 I 0.990
HNRNPR Macaca mulatta ENSMMUG00000010970 I 0.990
HNRNPR Loxodonta africana ENSLAFG00000012793 I 0.990
ENSCPOG00000009653 Cavia porcellus ENSCPOG00000009653 I 0.990
HNRNPR Equus caballus ENSECAG00000013733 I 0.990
Ame_R001024 Ailuropoda melanoleuca Ame_R001024 I 0.990
HNRNPR Callithrix jacchus ENSCJAG00000005512 I 0.990
A3KMV6_BOVIN Bos taurus ENSBTAG00000016578 I 0.990
ENSGALG00000000814 Gallus gallus ENSGALG00000000814 D 0.985
HNRNPR Monodelphis domestica ENSMODG00000016144 I 0.985
HNRNPR Meleagris gallopavo ENSMGAG00000001000 I 0.985
HNRNPR Taeniopygia guttata ENSTGUG00000000880 I 0.985
HNRNPR Ornithorhynchus anatinus ENSOANG00000003961 I 0.980
HNRNPR Choloepus hoffmanni ENSCHOG00000005090 I 0.975
HNRNPR Pan troglodytes ENSPTRG00000000324 I 0.975
HNRNPR Sorex araneus ENSSARG00000001732 I 0.975
HNRNPR Pteropus vampyrus ENSPVAG00000014804 I 0.975
HNRNPR Tupaia belangeri ENSTBEG00000002251 I 0.975
HNRNPR Oryctolagus cuniculus ENSOCUG00000006686 I 0.971
HNRNPR Canis familiaris ENSCAFG00000013308 I 0.971
HNRNPR Otolemur garnettii ENSOGAG00000009179 I 0.961
HNRNPR Erinaceus europaeus ENSEEUG00000010120 I 0.941
HNRNPR Myotis lucifugus ENSMLUG00000007582 I 0.926
ENSXETG00000007102 Xenopus tropicalis ENSXETG00000007102 D 0.920
AAI61702 Xenopus laevis AAI61702 I 0.910
HNRNPR Tursiops truncatus ENSTTRG00000007752 I 0.901
ENSCJAG00000013031 Callithrix jacchus ENSCJAG00000013031 I 0.873
Syncrip Rattus norvegicus ENSRNOG00000000204 I 0.856
Syncrip Mus musculus ENSMUSG00000032423 I 0.856
HNRNPR Gasterosteus aculeatus ENSGACG00000003202 I 0.856
HNRNPR Ochotona princeps ENSOPRG00000014561 I 0.853
SYNCRIP Echinops telfairi ENSETEG00000020109 I 0.851
SYNCRIP Sorex araneus ENSSARG00000005967 I 0.851
SYNCRIP Microcebus murinus ENSMICG00000007192 I 0.851
XR_022081.1 Pan troglodytes ENSPTRG00000018393 I 0.851
ENSPPYG00000016819 Pongo pygmaeus ENSPPYG00000016819 I 0.851
SYNCRIP Homo sapiens ENSG00000135316 I 0.851
SYNCRIP Sus scrofa ENSSSCG00000004294 I 0.851
HNRNPR Tetraodon nigroviridis ENSTNIG00000017576 I 0.851
Ame_R011496 Ailuropoda melanoleuca Ame_R011496 I 0.851
AAH70529 Xenopus laevis AAH70529 I 0.851
SYNCRIP Canis familiaris ENSCAFG00000003024 I 0.851
SYNCRIP Callithrix jacchus ENSCJAG00000015352 I 0.851
SYNCRIP Cavia porcellus ENSCPOG00000012415 I 0.851
SYNCRIP Tarsius syrichta ENSTSYG00000013305 I 0.851
SYNCRIP Vicugna pacos ENSVPAG00000001061 I 0.851
syncrip Danio rerio ENSDARG00000040184 I 0.851
SYNCRIP Pteropus vampyrus ENSPVAG00000011888 I 0.851
XM_001366708.1 Monodelphis domestica ENSMODG00000018345 I 0.851
A7E355_BOVIN Bos taurus ENSBTAG00000006672 I 0.851
SYNCRIP Loxodonta africana ENSLAFG00000018172 I 0.851
XM_001362737.1 Monodelphis domestica ENSMODG00000000609 I 0.851
SYNCRIP Myotis lucifugus ENSMLUG00000006919 I 0.851
SYNCRIP Macaca mulatta ENSMMUG00000012575 I 0.851
SYNCRIP Oryctolagus cuniculus ENSOCUG00000000601 I 0.851
SYNCRIP Gorilla gorilla ENSGGOG00000012898 I 0.851
SYNCRIP Oryzias latipes ENSORLG00000009190 I 0.851
SYNCRIP Gasterosteus aculeatus ENSGACG00000011665 I 0.851
HNRNPR Takifugu rubripes ENSTRUG00000008817 I 0.847
ENSXETG00000018075 Xenopus tropicalis ENSXETG00000018075 D 0.847
Q5ZLH7_CHICK Gallus gallus ENSGALG00000015830 I 0.847
SYNCRIP Meleagris gallopavo ENSMGAG00000013690 I 0.847
HNRNPR Oryzias latipes ENSORLG00000002515 I 0.844
SYNCRIP Takifugu rubripes ENSTRUG00000014766 I 0.842
SYNCRIP Anolis carolinensis ENSACAG00000015234 I 0.842
SYNCRIP Ornithorhynchus anatinus ENSOANG00000010099 I 0.842
SYNCRIP Tetraodon nigroviridis ENSTNIG00000002821 I 0.833
SYNCRIP Gasterosteus aculeatus ENSGACG00000009124 I 0.833
SYNCRIP Oryzias latipes ENSORLG00000014840 I 0.828
HNRNPR Procavia capensis ENSPCAG00000010462 I 0.825
HNRNPR Macropus eugenii ENSMEUG00000003769 I 0.825
SYNCRIP Takifugu rubripes ENSTRUG00000005365 I 0.823
syncripl Danio rerio ENSDARG00000026723 I 0.823
SYNCRIP Tetraodon nigroviridis ENSTNIG00000017299 I 0.823
ENSRNOG00000033356 Rattus norvegicus ENSRNOG00000033356 I 0.787
SYNCRIP Otolemur garnettii ENSOGAG00000001721 I 0.725
Syncrip Dipodomys ordii ENSDORG00000005217 I 0.725
HNRNPR Felis catus ENSFCAG00000019123 I 0.725
LOC100070472 Equus caballus ENSECAG00000012464 I 0.708
SYNCRIP Dasypus novemcinctus ENSDNOG00000018345 I 0.705