SFPQ (Macaca mulatta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMMUG00000019154 T38965_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.812
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.812
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000025177 RRM 224 288
ENSMMUP00000025177 RRM 298 340

Links

Other RRM family RBPs
Other Macaca mulatta RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SFPQ Dasypus novemcinctus ENSDNOG00000003021 N 0.815
Ame_R005060 Ailuropoda melanoleuca Ame_R005060 I 0.812
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.812
SFPQ Homo sapiens ENSG00000116560 D 0.812
SFPQ Bos taurus ENSBTAG00000016328 I 0.812
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.812
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.812
SFPQ Cavia porcellus ENSCPOG00000015018 I 0.812
LOC100386194 Callithrix jacchus ENSCJAG00000001431 I 0.812
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.812
LOC100069588 Equus caballus ENSECAG00000000642 I 0.812
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.812
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.812
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.812
ENSPPYG00000001560 Pongo pygmaeus ENSPPYG00000001560 I 0.812
SFPQ Procavia capensis ENSPCAG00000006164 I 0.812
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.812
SFPQ Echinops telfairi ENSETEG00000001095 I 0.812
SFPQ Microcebus murinus ENSMICG00000011755 I 0.812
Sfpq Mus musculus ENSMUSG00000028820 I 0.812
SFPQ Spermophilus tridecemlineatus ENSSTOG00000014004 I 0.812
Sfpq Rattus norvegicus ENSRNOG00000013154 I 0.812
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.803
XM_532566.2 Canis familiaris ENSCAFG00000018271 I 0.797
ENSACAG00000013307 Anolis carolinensis ENSACAG00000013307 I 0.795
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.789
ENSMODG00000017937 Monodelphis domestica ENSMODG00000017937 I 0.789
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.788
Q91017_CHICK Gallus gallus ENSGALG00000002514 I 0.788
SFPQ Taeniopygia guttata ENSTGUG00000001722 I 0.788
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.786
ENSOANG00000008789 Ornithorhynchus anatinus ENSOANG00000008789 I 0.782
sfpq Xenopus tropicalis ENSXETG00000009682 I 0.748
ENSCAFG00000017608 Canis familiaris ENSCAFG00000017608 I 0.740
SFPQ Pteropus vampyrus ENSPVAG00000001865 I 0.737
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.733
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.725
sfpq Danio rerio ENSDARG00000011564 I 0.713