CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MYEF2
(
Ochotona princeps
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOPRG00000003919
T39952_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000003618
RRM
102
172
VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLN
ENSOPRP00000003618
RRM
233
302
IFVGKLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMH
ENSOPRP00000003618
RRM
547
591
VMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREID
Links
Other
RRM
family RBPs
Other
Ochotona princeps
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.876
MYEF2
Canis familiaris
ENSCAFG00000014008
N
0.876
Ame_R005511
Ailuropoda melanoleuca
Ame_R005511
N
0.876
MYEF2
Vicugna pacos
ENSVPAG00000004721
N
0.876
MYEF2
Homo sapiens
ENSG00000104177
N
0.876
Q5ZHY2_CHICK
Gallus gallus
ENSGALG00000004905
N
0.876
MYEF2
Oryctolagus cuniculus
ENSOCUG00000013043
N
0.876
MYEF2
Macaca mulatta
ENSMMUG00000018834
N
0.876
MYEF2
Meleagris gallopavo
ENSMGAG00000006915
N
0.876
MYEF2
Tursiops truncatus
ENSTTRG00000008076
N
0.876
A6QQP0_BOVIN
Bos taurus
ENSBTAG00000008771
N
0.876
ENSPPYG00000006452
Pongo pygmaeus
ENSPPYG00000006452
N
0.876
MYEF2
Pan troglodytes
ENSPTRG00000007042
N
0.876
MYEF2
Procavia capensis
ENSPCAG00000016660
N
0.876
MYEF2
Spermophilus tridecemlineatus
ENSSTOG00000007740
N
0.872
MYEF2
Callithrix jacchus
ENSCJAG00000001875
N
0.871
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.871
MYEF2
Loxodonta africana
ENSLAFG00000012990
N
0.871
MYEF2
Gorilla gorilla
ENSGGOG00000014968
N
0.871
ENSDORG00000015835
Dipodomys ordii
ENSDORG00000015835
N
0.871
MYEF2
Taeniopygia guttata
ENSTGUG00000007130
N
0.871
MYEF2
Monodelphis domestica
ENSMODG00000002744
N
0.867
Myef2
Mus musculus
ENSMUSG00000027201
N
0.867
MYEF2
Sus scrofa
ENSSSCG00000004661
N
0.867
MYEF2
Anolis carolinensis
ENSACAG00000004806
N
0.833
MYEF2
Cavia porcellus
ENSCPOG00000010584
N
0.829
MYEF2
Otolemur garnettii
ENSOGAG00000010907
N
0.814
MYEF2
Tarsius syrichta
ENSTSYG00000010575
N
0.810
myef2
Xenopus tropicalis
ENSXETG00000018412
N
0.795
MYEF2
Tetraodon nigroviridis
ENSTNIG00000009526
N
0.791
AAI08588
Xenopus laevis
AAI08588
N
0.790
MYEF2
Takifugu rubripes
ENSTRUG00000016967
N
0.789
MYEF2
Gasterosteus aculeatus
ENSGACG00000016759
N
0.781
MYEF2
Oryzias latipes
ENSORLG00000002730
N
0.781
MYEF2
Erinaceus europaeus
ENSEEUG00000006405
N
0.775
MYEF2
Sorex araneus
ENSSARG00000003264
N
0.767
myef2
Danio rerio
ENSDARG00000059398
N
0.767
MYEF2
Dasypus novemcinctus
ENSDNOG00000004667
N
0.746