CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MYEF2
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000002744
T39055_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000003337
RRM
107
177
VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDSEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLN
ENSMODP00000003337
RRM
240
309
IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFDQAIEAVQAISMFNGQFLFDRPMH
ENSMODP00000003337
RRM
518
586
IMIKELKEKDLYRPLKIKFEQVSHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREID
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
63 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MYEF2
Pan troglodytes
ENSPTRG00000007042
N
0.914
MYEF2
Procavia capensis
ENSPCAG00000016660
N
0.914
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.914
MYEF2
Canis familiaris
ENSCAFG00000014008
N
0.914
A6QQP0_BOVIN
Bos taurus
ENSBTAG00000008771
N
0.914
MYEF2
Tursiops truncatus
ENSTTRG00000008076
N
0.914
MYEF2
Vicugna pacos
ENSVPAG00000004721
N
0.914
Ame_R005511
Ailuropoda melanoleuca
Ame_R005511
N
0.914
MYEF2
Homo sapiens
ENSG00000104177
N
0.914
ENSPPYG00000006452
Pongo pygmaeus
ENSPPYG00000006452
N
0.914
MYEF2
Meleagris gallopavo
ENSMGAG00000006915
N
0.914
MYEF2
Macaca mulatta
ENSMMUG00000018834
N
0.914
MYEF2
Oryctolagus cuniculus
ENSOCUG00000013043
N
0.914
Q5ZHY2_CHICK
Gallus gallus
ENSGALG00000004905
N
0.914
MYEF2
Loxodonta africana
ENSLAFG00000012990
N
0.910
MYEF2
Taeniopygia guttata
ENSTGUG00000007130
N
0.910
MYEF2
Callithrix jacchus
ENSCJAG00000001875
N
0.910
MYEF2
Gorilla gorilla
ENSGGOG00000014968
N
0.910
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.910
ENSDORG00000015835
Dipodomys ordii
ENSDORG00000015835
N
0.910
Myef2
Mus musculus
ENSMUSG00000027201
N
0.905
MYEF2
Sus scrofa
ENSSSCG00000004661
N
0.905
MYEF2
Anolis carolinensis
ENSACAG00000004806
N
0.871
MYEF2
Cavia porcellus
ENSCPOG00000010584
N
0.867
MYEF2
Ochotona princeps
ENSOPRG00000003919
N
0.867
MYEF2
Tarsius syrichta
ENSTSYG00000010575
N
0.848
myef2
Xenopus tropicalis
ENSXETG00000018412
N
0.829
MYEF2
Otolemur garnettii
ENSOGAG00000010907
N
0.829
MYEF2
Takifugu rubripes
ENSTRUG00000016967
N
0.826
AAI08588
Xenopus laevis
AAI08588
N
0.824
MYEF2
Tetraodon nigroviridis
ENSTNIG00000009526
N
0.820
MYEF2
Oryzias latipes
ENSORLG00000002730
N
0.819
MYEF2
Gasterosteus aculeatus
ENSGACG00000016759
N
0.810
myef2
Danio rerio
ENSDARG00000059398
N
0.800
MYEF2
Sorex araneus
ENSSARG00000003264
N
0.795
MYEF2
Spermophilus tridecemlineatus
ENSSTOG00000007740
N
0.776
HNRNPM
Echinops telfairi
ENSETEG00000019712
N
0.716
ENSPPYG00000009506
Pongo pygmaeus
ENSPPYG00000009506
N
0.716
HNRNPM
Equus caballus
ENSECAG00000023868
N
0.716
HNRNPM
Homo sapiens
ENSG00000099783
N
0.716
HNRNPM
Gorilla gorilla
ENSGGOG00000003498
N
0.716
HNRNPM
Macaca mulatta
ENSMMUG00000018806
N
0.716
HNRNPM
Loxodonta africana
ENSLAFG00000013603
N
0.716
ENSOCUG00000000552
Oryctolagus cuniculus
ENSOCUG00000000552
N
0.716
ENSOCUG00000024611
Oryctolagus cuniculus
ENSOCUG00000024611
N
0.716
HNRNPM
Cavia porcellus
ENSCPOG00000015182
N
0.716
HNRNPM
Sus scrofa
ENSSSCG00000013602
N
0.716
Ame_R017061
Ailuropoda melanoleuca
Ame_R017061
N
0.716
XM_001365870.1
Monodelphis domestica
ENSMODG00000003801
N
0.716
HNRNPM
Tursiops truncatus
ENSTTRG00000009769
N
0.716
HNRNPM
Pan troglodytes
ENSPTRG00000010424
N
0.716
Q3SYX2_BOVIN
Bos taurus
ENSBTAG00000021039
N
0.716
Hnrpm
Rattus norvegicus
ENSRNOG00000007921
N
0.716
HNRNPM
Choloepus hoffmanni
ENSCHOG00000013627
N
0.716
HNRNPM
Canis familiaris
ENSCAFG00000018524
N
0.716
HNRNPM
Myotis lucifugus
ENSMLUG00000006696
N
0.711
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.711
HNRNPM
Callithrix jacchus
ENSCJAG00000010802
N
0.711
Q5ZL80_CHICK
Gallus gallus
ENSGALG00000000377
N
0.708
HNRNPM
Procavia capensis
ENSPCAG00000009678
N
0.706
Gm9833
Mus musculus
ENSMUSG00000049230
N
0.705
HNRNPM
Sorex araneus
ENSSARG00000000267
N
0.703
HNRNPM
Tupaia belangeri
ENSTBEG00000008718
N
0.701