CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MYEF2
(
Otolemur garnettii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOGAG00000010907
T39872_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000009767
RRM
88
157
FISNIPYDMKWQAXXXXXXXXXGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLN
ENSOGAP00000009767
RRM
223
289
XXLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMH
ENSOGAP00000009767
RRM
510
578
IFVRNLPFDLTWQKLKXXXXXXXHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREID
Links
Other
RRM
family RBPs
Other
Otolemur garnettii
RBPs
62 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A6QQP0_BOVIN
Bos taurus
ENSBTAG00000008771
N
0.895
Ame_R005511
Ailuropoda melanoleuca
Ame_R005511
N
0.895
MYEF2
Macaca mulatta
ENSMMUG00000018834
N
0.895
MYEF2
Canis familiaris
ENSCAFG00000014008
N
0.895
MYEF2
Meleagris gallopavo
ENSMGAG00000006915
N
0.895
MYEF2
Homo sapiens
ENSG00000104177
N
0.895
Q5ZHY2_CHICK
Gallus gallus
ENSGALG00000004905
N
0.895
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.895
MYEF2
Tursiops truncatus
ENSTTRG00000008076
N
0.895
MYEF2
Vicugna pacos
ENSVPAG00000004721
N
0.895
MYEF2
Procavia capensis
ENSPCAG00000016660
N
0.895
MYEF2
Pan troglodytes
ENSPTRG00000007042
N
0.895
MYEF2
Oryctolagus cuniculus
ENSOCUG00000013043
N
0.895
ENSPPYG00000006452
Pongo pygmaeus
ENSPPYG00000006452
N
0.895
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.890
MYEF2
Callithrix jacchus
ENSCJAG00000001875
N
0.890
MYEF2
Taeniopygia guttata
ENSTGUG00000007130
N
0.890
MYEF2
Gorilla gorilla
ENSGGOG00000014968
N
0.890
MYEF2
Loxodonta africana
ENSLAFG00000012990
N
0.890
ENSDORG00000015835
Dipodomys ordii
ENSDORG00000015835
N
0.890
MYEF2
Sus scrofa
ENSSSCG00000004661
N
0.886
Myef2
Mus musculus
ENSMUSG00000027201
N
0.886
MYEF2
Anolis carolinensis
ENSACAG00000004806
N
0.852
MYEF2
Cavia porcellus
ENSCPOG00000010584
N
0.848
MYEF2
Sorex araneus
ENSSARG00000003264
N
0.842
MYEF2
Tarsius syrichta
ENSTSYG00000010575
N
0.829
MYEF2
Monodelphis domestica
ENSMODG00000002744
N
0.829
myef2
Xenopus tropicalis
ENSXETG00000018412
N
0.819
MYEF2
Ochotona princeps
ENSOPRG00000003919
N
0.814
AAI08588
Xenopus laevis
AAI08588
N
0.810
MYEF2
Tetraodon nigroviridis
ENSTNIG00000009526
N
0.801
MYEF2
Takifugu rubripes
ENSTRUG00000016967
N
0.798
MYEF2
Gasterosteus aculeatus
ENSGACG00000016759
N
0.790
MYEF2
Oryzias latipes
ENSORLG00000002730
N
0.790
myef2
Danio rerio
ENSDARG00000059398
N
0.767
MYEF2
Spermophilus tridecemlineatus
ENSSTOG00000007740
N
0.737
HNRNPM
Microcebus murinus
ENSMICG00000002532
N
0.731
HNRNPM
Gorilla gorilla
ENSGGOG00000003498
N
0.711
ENSOCUG00000024611
Oryctolagus cuniculus
ENSOCUG00000024611
N
0.711
HNRNPM
Macaca mulatta
ENSMMUG00000018806
N
0.711
HNRNPM
Loxodonta africana
ENSLAFG00000013603
N
0.711
ENSOCUG00000000552
Oryctolagus cuniculus
ENSOCUG00000000552
N
0.711
XM_001365870.1
Monodelphis domestica
ENSMODG00000003801
N
0.711
HNRNPM
Canis familiaris
ENSCAFG00000018524
N
0.711
HNRNPM
Pan troglodytes
ENSPTRG00000010424
N
0.711
Q3SYX2_BOVIN
Bos taurus
ENSBTAG00000021039
N
0.711
Ame_R017061
Ailuropoda melanoleuca
Ame_R017061
N
0.711
HNRNPM
Tursiops truncatus
ENSTTRG00000009769
N
0.711
HNRNPM
Sus scrofa
ENSSSCG00000013602
N
0.711
Hnrpm
Rattus norvegicus
ENSRNOG00000007921
N
0.711
HNRNPM
Choloepus hoffmanni
ENSCHOG00000013627
N
0.711
HNRNPM
Homo sapiens
ENSG00000099783
N
0.711
HNRNPM
Echinops telfairi
ENSETEG00000019712
N
0.711
HNRNPM
Equus caballus
ENSECAG00000023868
N
0.711
ENSPPYG00000009506
Pongo pygmaeus
ENSPPYG00000009506
N
0.711
HNRNPM
Cavia porcellus
ENSCPOG00000015182
N
0.711
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.706
HNRNPM
Myotis lucifugus
ENSMLUG00000006696
N
0.706
HNRNPM
Callithrix jacchus
ENSCJAG00000010802
N
0.706
Q5ZL80_CHICK
Gallus gallus
ENSGALG00000000377
N
0.703
HNRNPM
Procavia capensis
ENSPCAG00000009678
N
0.701
HNRNPM
Spermophilus tridecemlineatus
ENSSTOG00000008112
N
0.700