estExt_fgeneshTA2_pm.C_70022 (Trichoplax adhaerens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgeneshTA2_pm.C_70022 T51153_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgeneshTA2_pm.C_70022 RRM 7 77

Links

Other RRM family RBPs
Other Trichoplax adhaerens RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.803
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.775
PPIE Oryzias latipes ENSORLG00000017469 N 0.775
PPIE Gallus gallus ENSGALG00000013383 N 0.775
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.775
PPIE Monodelphis domestica ENSMODG00000017659 N 0.775
LOC100054084 Equus caballus ENSECAG00000008955 N 0.761
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.761
PPIE Macaca mulatta ENSMMUG00000018869 N 0.761
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.761
PPIE Loxodonta africana ENSLAFG00000028312 N 0.761
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.761
PPIE Homo sapiens ENSG00000084072 N 0.761
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.761
LOC100054282 Equus caballus ENSECAG00000024285 N 0.761
Ppie Mus musculus ENSMUSG00000028651 N 0.761
PPIE Sorex araneus ENSSARG00000005703 N 0.761
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.761
PPIE Sus scrofa ENSSSCG00000003664 N 0.761
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.761
ISCW002449 Ixodes scapularis ISCW002449 N 0.761
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.761
PPIE Pan troglodytes ENSPTRG00000000577 N 0.761
PPIE Microcebus murinus ENSMICG00000016676 N 0.761
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.761
PPIE Canis familiaris ENSCAFG00000003031 N 0.761
PPIE Cavia porcellus ENSCPOG00000007365 N 0.750
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.746
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.746
ppie Danio rerio ENSDARG00000059270 N 0.746
PPIE Anolis carolinensis ENSACAG00000002688 N 0.746
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.732
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.732
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.732
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.732
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.732
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.732
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.732
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.732
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.718
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.718
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.718
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.718
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.718
AAI23372 Xenopus laevis AAI23372 N 0.718
PPIE Felis catus ENSFCAG00000006027 N 0.718
107863 Helobdella robusta 107863 N 0.704
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.704
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.704
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.704