GRMZM2G145562 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G145562 T54158_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G145562_P01 RRM 27 94

Links

Other RRM family RBPs
Other Zea mays RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G141386 Zea mays GRMZM2G141386 I 0.941
SB01G038700 Sorghum bicolor Sb01g038700 I 0.926
LOC_Os03g17760 Oryza sativa LOC_Os03g17760 I 0.912
ppa026384m Prunus persica ppa026384m I 0.882
MDP0000308970 Malus x domestica MDP0000308970 I 0.853
MDP0000125082 Malus x domestica MDP0000125082 I 0.853
29923.m000811 Ricinus communis 29923.m000811 I 0.838
PK29603.1 Cannabis sativa PK29603.1 I 0.826
B9HLZ0_POPTR Populus trichocarpa POPTR_0008s04430 I 0.824
cassava2993.m1 Manihot esculenta cassava2993.m1 I 0.809
A9P7Z9_POPTR Populus trichocarpa POPTR_0010s22380 I 0.809
mgf016660m Mimulus guttatus mgf016660m I 0.809
cassava42438.valid.m1 Manihot esculenta cassava42438.valid.m1 I 0.794
Cucsa.165980 Cucumis sativus Cucsa.165980 I 0.779
XM_002877953.1 Arabidopsis lyrata fgenesh2_kg.5__1875__AT3G54770.1 N 0.768
chr1.CM0105.870.nc Lotus japonicus chr1.CM0105.870.nc N 0.768
AT3G54770 Arabidopsis thaliana AT3G54770-TAIR-G N 0.768
Glyma07g05250.1 Glycine max Glyma07g05250.1 N 0.757
Glyma16g01780.1 Glycine max Glyma16g01780.1 N 0.746
GRMZM2G042195 Zea mays GRMZM2G042195 I 0.721
SB04G030020 Sorghum bicolor Sb04g030020 I 0.721
gw1.126.80.1 Physcomitrella patens gw1.126.80.1 I 0.721
GRMZM2G123796 Zea mays GRMZM2G123796 I 0.706
gw1.51.103.1 Physcomitrella patens gw1.51.103.1 I 0.706