AAI29577 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAI29577 T59628_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.944
RBM42
M142_0.6 		Homo sapiens AACUAMG RNAcompete
Ray et al.(2013)
RNCMPT00151 		0.901
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAI29577 RRM 288 358

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSXETG00000017599 Xenopus tropicalis ENSXETG00000017599 D 0.944
RBM42 Anolis carolinensis ENSACAG00000005495 I 0.930
A2VDB3 Xenopus laevis A2VDB3 I 0.930
AAI29698 Xenopus laevis AAI29698 I 0.930
RBM42 Oryzias latipes ENSORLG00000003387 I 0.915
RBM42 Gasterosteus aculeatus ENSGACG00000004170 I 0.915
RBM42 Tetraodon nigroviridis ENSTNIG00000011669 I 0.915
RBM42 Takifugu rubripes ENSTRUG00000004663 I 0.915
RBM42 Ochotona princeps ENSOPRG00000001229 I 0.901
RBM42 Macaca mulatta ENSMMUG00000018954 I 0.901
RBM42 Otolemur garnettii ENSOGAG00000004144 I 0.901
RBM42 Monodelphis domestica ENSMODG00000013957 I 0.901
Rbm42 Mus musculus ENSMUSG00000036733 I 0.901
RBM42 Procavia capensis ENSPCAG00000013053 I 0.901
Rbm42 Rattus norvegicus ENSRNOG00000024278 I 0.901
RBM42 Spermophilus tridecemlineatus ENSSTOG00000013050 I 0.901
RBM42 Tarsius syrichta ENSTSYG00000014688 I 0.901
Ame_R009099 Ailuropoda melanoleuca Ame_R009099 I 0.901
RBM42 Sus scrofa ENSSSCG00000002905 I 0.901
RBM42 Sorex araneus ENSSARG00000010724 I 0.901
RBM42 Pan troglodytes ENSPTRG00000010852 I 0.901
RBM42 Pteropus vampyrus ENSPVAG00000012815 I 0.901
RBM42 Myotis lucifugus ENSMLUG00000011334 I 0.901
ENSPPYG00000009871 Pongo pygmaeus ENSPPYG00000009871 I 0.901
RBM42 Oryctolagus cuniculus ENSOCUG00000003337 I 0.901
RBM42 Cavia porcellus ENSCPOG00000012365 I 0.901
LOC100051102 Equus caballus ENSECAG00000018215 I 0.901
RBM42 Callithrix jacchus ENSCJAG00000010220 I 0.901
RBM42 Canis familiaris ENSCAFG00000006925 I 0.901
RBM42 Microcebus murinus ENSMICG00000009880 I 0.901
RBM42_BOVIN Bos taurus ENSBTAG00000013440 I 0.901
RBM42 Erinaceus europaeus ENSEEUG00000004841 I 0.901
rbm42 Danio rerio ENSDARG00000039910 I 0.901
RBM42 Gorilla gorilla ENSGGOG00000009972 I 0.901
ENSMEUG00000016300 Macropus eugenii ENSMEUG00000016300 I 0.901
RBM42 Homo sapiens ENSG00000126254 D 0.901
estExt_fgenesh2_pg.C_7640002 Branchiostoma floridae estExt_fgenesh2_pg.C_7640002 I 0.831
estExt_fgenesh2_pg.C_360096 Branchiostoma floridae estExt_fgenesh2_pg.C_360096 I 0.831
ENSMEUG00000003054 Macropus eugenii ENSMEUG00000003054 I 0.803
RBM42 Loxodonta africana ENSLAFG00000014993 N 0.803
RBM42 Felis catus ENSFCAG00000006376 I 0.761
XP_002167334.1 Hydra magnipapillata XP_002167334.1 I 0.746
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.746
e_gw1.30.201.1 Daphnia pulex e_gw1.30.201.1 I 0.732
PHUM106890 Pediculus humanus PHUM106890 I 0.732
estExt_Genewise1Plus.C_1180017 Capitella teleta estExt_Genewise1Plus.C_1180017 I 0.718
BGIBMGA005213 Bombyx mori BGIBMGA005213 I 0.718
AGAP010200 Anopheles gambiae AGAP010200 I 0.718
RBM42 Echinops telfairi ENSETEG00000007878 I 0.718
MDP0000283678 Malus x domestica MDP0000283678 I 0.704
MDP0000320908 Malus x domestica MDP0000320908 I 0.704
ppa010477m Prunus persica ppa010477m I 0.704
PK16312.1 Cannabis sativa PK16312.1 I 0.704
SPPG_03010 Spizellomyces punctatus SPPG_03010 I 0.704
BRADI3G12840 Brachypodium distachyon BRADI3G12840 I 0.704
Aqu1.218430 Amphimedon queenslandica Aqu1.218430 I 0.704
76581 Helobdella robusta 76581 I 0.704
amel4_ncbi_hmm2520 Apis mellifera amel4_ncbi_hmm2520 I 0.704
AAEL010642 Aedes aegypti AAEL010642 I 0.704
e_gw1.16.225.1 Lottia gigantea e_gw1.16.225.1 I 0.704