nono (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSORLG00000012801 T085268_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
nono
M19721_2.00		 Oryzias latipes NGURGUKK JPLE
Sasse et al.(2025)
RM_Ory.lat_ENSORLG00000012801 		0.100

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.100
(77.65%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000016028 RRM 70 147
ENSORLP00000016028 RRM 144 213

RNA contacting residues

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSONIG00000020497 Oreochromis niloticus ENSONIG00000020497 I 0.901
nono Takifugu rubripes ENSTRUG00000005554 I 0.899
nono Gasterosteus aculeatus ENSGACG00000011824 I 0.899
ENSPFOG00000016436 Poecilia formosa ENSPFOG00000016436 I 0.878
ENSXMAG00000019883 Xiphophorus maculatus ENSXMAG00000019883 I 0.878
ENSLOCG00000014739 Lepisosteus oculatus ENSLOCG00000014739 I 0.831
ENSAMXG00000006846 Astyanax mexicanus ENSAMXG00000006846 I 0.797
nono Danio rerio ENSDARG00000020482 I 0.777
nono Xenopus tropicalis XB-GENE-1002494 I 0.743
nono.L Xenopus laevis XB-GENE-1002501 I 0.730
ENSAMXG00000015717 Astyanax mexicanus ENSAMXG00000015717 I 0.730
sfpq Tetraodon nigroviridis ENSTNIG00000011331 I 0.724
sfpq Takifugu rubripes ENSTRUG00000003783 I 0.723
sfpq Gasterosteus aculeatus ENSGACG00000002034 I 0.718
sfpq Xenopus tropicalis XB-GENE-5968416 I 0.703
ENSAMXG00000011538 Astyanax mexicanus ENSAMXG00000011538 I 0.703
ENSLOCG00000001067 Lepisosteus oculatus ENSLOCG00000001067 I 0.703
ENSLOCG00000010832 Lepisosteus oculatus ENSLOCG00000010832 I 0.703