ENSONIG00000020497 (Oreochromis niloticus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSONIG00000020497 T084966_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
ENSONIG00000020497
M18882_2.00		 Oreochromis niloticus NGURGUKK JPLE
Sasse et al.(2025)
RM_Ore.nil_ENSONIG00000020497 		0.074

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.074
(87.88%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000025802 RRM 60 137
ENSONIP00000025802 RRM 134 207

RNA contacting residues

Links

Other RRM family RBPs
Other Oreochromis niloticus RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nono Gasterosteus aculeatus ENSGACG00000011824 I 0.934
nono Takifugu rubripes ENSTRUG00000005554 I 0.921
nono Oryzias latipes ENSORLG00000012801 I 0.901
ENSPFOG00000016436 Poecilia formosa ENSPFOG00000016436 I 0.868
ENSXMAG00000019883 Xiphophorus maculatus ENSXMAG00000019883 I 0.868
ENSLOCG00000014739 Lepisosteus oculatus ENSLOCG00000014739 I 0.836
ENSAMXG00000006846 Astyanax mexicanus ENSAMXG00000006846 I 0.809
nono Danio rerio ENSDARG00000020482 I 0.803
nono Xenopus tropicalis XB-GENE-1002494 I 0.743
sfpq Tetraodon nigroviridis ENSTNIG00000011331 I 0.730
sfpq Takifugu rubripes ENSTRUG00000003783 I 0.730
nono.L Xenopus laevis XB-GENE-1002501 I 0.730
ENSAMXG00000015717 Astyanax mexicanus ENSAMXG00000015717 I 0.717
sfpq Gasterosteus aculeatus ENSGACG00000002034 I 0.717
ENSLACG00000010762 Latimeria chalumnae ENSLACG00000010762 I 0.711
pspc1 Xenopus tropicalis XB-GENE-492866 I 0.704
pspc1 Danio rerio ENSDARG00000006621 I 0.704
ENSGMOG00000011950 Gadus morhua ENSGMOG00000011950 I 0.704
ENSLOCG00000010832 Lepisosteus oculatus ENSLOCG00000010832 I 0.704