nono (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSGACG00000011824 T080733_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
nono
M11702_2.00		 Gasterosteus aculeatus NGURGUKK JPLE
Sasse et al.(2025)
RM_Gas.acu_ENSGACG00000011824 		0.090

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.090
(83.11%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000015633 RRM 60 137
ENSGACP00000015633 RRM 134 203

RNA contacting residues

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSONIG00000020497 Oreochromis niloticus ENSONIG00000020497 I 0.934
nono Takifugu rubripes ENSTRUG00000005554 I 0.932
nono Oryzias latipes ENSORLG00000012801 I 0.899
ENSPFOG00000016436 Poecilia formosa ENSPFOG00000016436 I 0.872
ENSXMAG00000019883 Xiphophorus maculatus ENSXMAG00000019883 I 0.872
ENSLOCG00000014739 Lepisosteus oculatus ENSLOCG00000014739 I 0.838
ENSAMXG00000006846 Astyanax mexicanus ENSAMXG00000006846 I 0.811
nono Danio rerio ENSDARG00000020482 I 0.804
nono Xenopus tropicalis XB-GENE-1002494 I 0.750
nono.L Xenopus laevis XB-GENE-1002501 I 0.736
sfpq Takifugu rubripes ENSTRUG00000003783 I 0.730
ENSGMOG00000015074 Gadus morhua ENSGMOG00000015074 I 0.709
ENSLACG00000010762 Latimeria chalumnae ENSLACG00000010762 I 0.709
ENSLOCG00000001067 Lepisosteus oculatus ENSLOCG00000001067 I 0.709
pspc1 Xenopus tropicalis XB-GENE-492866 I 0.709
sfpq Xenopus tropicalis XB-GENE-5968416 I 0.709
ENSAMXG00000015717 Astyanax mexicanus ENSAMXG00000015717 I 0.709
pspc1 Danio rerio ENSDARG00000006621 I 0.709
NONO Gallus gallus ENSGALG00000005507 I 0.705
NONO Meleagris gallopavo ENSMGAG00000008869 I 0.705
NONO Taeniopygia guttata ENSTGUG00000007048 I 0.705
Afo_R007329 Aptenodytes forsteri Afo_R007329 I 0.705
Brh_R000687 Buceros rhinoceros Brh_R000687 I 0.705
Tal_R004102 Tyto alba Tal_R004102 I 0.705
ENSAPLG00000002642 Anas platyrhynchos ENSAPLG00000002642 I 0.705
ENSFALG00000011765 Ficedula albicollis ENSFALG00000011765 I 0.705
sfpq Gasterosteus aculeatus ENSGACG00000002034 I 0.705
sfpq Tetraodon nigroviridis ENSTNIG00000011331 I 0.704
ENSLACG00000000598 Latimeria chalumnae ENSLACG00000000598 I 0.703
ENSLOCG00000010832 Lepisosteus oculatus ENSLOCG00000010832 I 0.703