ENSXMAG00000019883 (Xiphophorus maculatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSXMAG00000019883 T089267_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
ENSXMAG00000019883
M29266_2.00		 Xiphophorus maculatus NGURGUKK JPLE
Sasse et al.(2025)
RM_Xip.mac_ENSXMAG00000019883 		0.088

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.088
(84.21%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000019931 RRM 62 139
ENSXMAP00000019931 RRM 136 204

RNA contacting residues

Links

Other RRM family RBPs
Other Xiphophorus maculatus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPFOG00000016436 Poecilia formosa ENSPFOG00000016436 I 0.986
nono Oryzias latipes ENSORLG00000012801 I 0.878
nono Takifugu rubripes ENSTRUG00000005554 I 0.878
nono Gasterosteus aculeatus ENSGACG00000011824 I 0.872
ENSONIG00000020497 Oreochromis niloticus ENSONIG00000020497 I 0.868
ENSLOCG00000014739 Lepisosteus oculatus ENSLOCG00000014739 I 0.803
nono Danio rerio ENSDARG00000020482 I 0.796
ENSAMXG00000006846 Astyanax mexicanus ENSAMXG00000006846 I 0.789
nono.L Xenopus laevis XB-GENE-1002501 I 0.735
pspc1 Xenopus tropicalis XB-GENE-492866 I 0.735
sfpq Takifugu rubripes ENSTRUG00000003783 I 0.735
nono Xenopus tropicalis XB-GENE-1002494 I 0.730
ENSAMXG00000011538 Astyanax mexicanus ENSAMXG00000011538 I 0.728
pspc1 Danio rerio ENSDARG00000006621 I 0.721
ENSLACG00000010762 Latimeria chalumnae ENSLACG00000010762 I 0.721
ENSLOCG00000001067 Lepisosteus oculatus ENSLOCG00000001067 I 0.721
ENSGMOG00000015074 Gadus morhua ENSGMOG00000015074 I 0.714
ENSLOCG00000010832 Lepisosteus oculatus ENSLOCG00000010832 I 0.714
sfpq Tetraodon nigroviridis ENSTNIG00000011331 I 0.711
sfpq Xenopus tropicalis XB-GENE-5968416 I 0.707
sfpq Gasterosteus aculeatus ENSGACG00000002034 I 0.705
Aan_R001274 Calypte anna Aan_R001274 I 0.701
Afo_R008576 Aptenodytes forsteri Afo_R008576 I 0.701
Brh_R000965 Buceros rhinoceros Brh_R000965 I 0.701
Ogr05221 Ophisaurus gracilis Ogr05221 I 0.701
Pvit_12920 Pogona vitticeps Pvit_12920 I 0.701
Tal_R009732 Tyto alba Tal_R009732 I 0.701
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.701
ENSAMXG00000015717 Astyanax mexicanus ENSAMXG00000015717 I 0.701
ENSFALG00000008750 Ficedula albicollis ENSFALG00000008750 I 0.701
PSPC1 Gallus gallus ENSGALG00000017142 I 0.701
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.701
ENSGMOG00000011950 Gadus morhua ENSGMOG00000011950 I 0.700