estExt_fgenesh1_pg.C_160206 (Cochliobolus heterostrophus C5)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 estExt_fgenesh1_pg.C_160206 T04992_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_160206 CCCH ZF 351 375
estExt_fgenesh1_pg.C_160206 CCCH ZF 380 403

Links

Other CCCH ZF family RBPs
Other Cochliobolus heterostrophus C5 RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08315.1 Alternaria brassicicola AB08315.1 N 1.000
ADR062W Ashbya gossypii ADR062W N 0.725
ACLA_033580 Aspergillus clavatus CADACLAG00003610 N 0.804
AFLA_103810 Aspergillus flavus CADAFLAG00012116 N 0.840
AFUA_3G05570 Aspergillus fumigatus CADAFUAG00005783 N 0.840
An11g11070 Aspergillus niger CADANGAG00009424 N 0.840
ANIA_03447 Aspergillus nidulans CADANIAG00009587 N 0.860
AO090020000028 Aspergillus oryzae CADAORAG00006562 N 0.840
ATEG_08978 Aspergillus terreus CADATEAG00006440 N 0.840
NFIA_071620 Neosartorya fischeri CADNFIAG00006536 N 0.840
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.740
CIMG_10872 Coccidioides immitis CIMG_10872 N 0.840
CLUG_02022 Candida lusitaniae CLUG_02022 N 0.720
CPSG_06815 Coccidioides posadasii CPSG_06815 N 0.840
CTRG_02259 Candida tropicalis CTRG_02259 N 0.706
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.740
EAT89389.2 Phaeosphaeria nodorum EAT89389.2 N 1.000
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.706
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.720
fgenesh1_pm.00118_#_26 Aspergillus carbonarius fgenesh1_pm.00118_#_26 N 0.840
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.700
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.700
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.800
gw1.2.2109.1 Mucor circinelloides gw1.2.2109.1 N 0.700
HCAG_10294 Histoplasma capsulatum HCAG_10294 N 0.840
MCYG_08235 Microsporum canis MCYG_08235 N 0.820
MGYG_05636 Microsporum gypseum MGYG_05636 N 0.820
orf19.7385 Candida albicans orf19.7385 N 0.700
PABG_05614 Paracoccidioides brasiliensis PABG_05614 N 0.820
Pc20g08250 Penicillium chrysogenum Pc20g08250 N 0.820
PMAA_005110 Penicillium marneffei PMAA_005110 N 0.840
PTRG_01963 Pyrenophora tritici repentis PTRG_01963 N 1.000
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.745
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.725
SNOG_02658 Stagonospora nodorum SNOG_02658 N 1.000
TEQG_01582 Trichophyton equinum TEQG_01582 N 0.820
TERG_02518 Trichophyton rubrum TERG_02518 N 0.820
UREG_06970 Uncinocarpus reesii UREG_06970 N 0.840
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.700
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.700
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.720
YALI0B12540g Yarrowia lipolytica YALI0B12540g N 0.760