CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSTTRG00000004906
(
Tursiops truncatus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSTTRG00000004906
T19705_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
hnRNPK
M026_0.6
Homo sapiens
CCAWMCC
RNAcompete
Ray et al.(2013)
RNCMPT00026
0.979
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000004627
KH
44
104
ELHILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPEHILSISADIETIGEILKKI
ENSTTRP00000004627
KH
146
209
ELRLLIHQSLAGGIIGVKGAKIKELRETTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKII
ENSTTRP00000004627
KH
382
444
TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
Links
Other
KH
family RBPs
Other
Tursiops truncatus
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAB26047
Xenopus laevis
AAB26047
I
0.952
AAH44711
Xenopus laevis
AAH44711
I
0.957
Ame_R002812
Ailuropoda melanoleuca
Ame_R002812
I
0.979
HNRNPK
Anolis carolinensis
ENSACAG00000001479
I
0.973
HNRPK_BOVIN
Bos taurus
ENSBTAG00000021131
I
0.984
XM_533511.2
Canis familiaris
ENSCAFG00000001399
I
0.957
XM_855974.1
Canis familiaris
ENSCAFG00000017503
I
0.941
HNRNPK
Choloepus hoffmanni
ENSCHOG00000010832
I
0.979
HNRNPK
Callithrix jacchus
ENSCJAG00000003750
I
0.979
ENSCPOG00000005024
Cavia porcellus
ENSCPOG00000005024
I
0.793
hnrpkl
Danio rerio
ENSDARG00000007034
I
0.941
hnrnpk
Danio rerio
ENSDARG00000018914
I
0.899
HNRNPK
Equus caballus
ENSECAG00000025104
I
0.979
HNRNPK
Erinaceus europaeus
ENSEEUG00000014624
I
0.984
HNRNPK
Echinops telfairi
ENSETEG00000016294
I
0.973
HNRNPK
Felis catus
ENSFCAG00000014862
I
0.931
hnRNPK
Homo sapiens
ENSG00000165119
D
0.979
HNRNPK
Gasterosteus aculeatus
ENSGACG00000007581
I
0.926
HNRNPK
Gallus gallus
ENSGALG00000012591
I
0.979
HNRPK_CHICK
Gallus gallus
ENSGALG00000014366
I
0.973
HNRNPK
Gorilla gorilla
ENSGGOG00000015500
I
0.979
HNRNPK
Loxodonta africana
ENSLAFG00000026567
I
0.973
HNRNPK
Macropus eugenii
ENSMEUG00000006975
I
0.979
ENSMMUG00000018871
Macaca mulatta
ENSMMUG00000018871
I
0.979
ENSMODG00000008402
Monodelphis domestica
ENSMODG00000008402
I
0.979
HNRNPK
Monodelphis domestica
ENSMODG00000018992
I
0.979
Hnrnpk
Mus musculus
ENSMUSG00000021546
I
0.979
Gm7964
Mus musculus
ENSMUSG00000063902
I
0.963
HNRNPK
Ornithorhynchus anatinus
ENSOANG00000014612
I
0.979
HNRPK_RABIT
Oryctolagus cuniculus
ENSOCUG00000010364
I
0.979
ENSOCUG00000025925
Oryctolagus cuniculus
ENSOCUG00000025925
I
0.904
HNRNPK
Otolemur garnettii
ENSOGAG00000007478
I
0.979
HNRNPK
Ochotona princeps
ENSOPRG00000015723
I
0.809
HNRNPK
Oryzias latipes
ENSORLG00000004704
I
0.819
HNRNPK
Oryzias latipes
ENSORLG00000005161
I
0.920
HNRNPK
Procavia capensis
ENSPCAG00000016196
I
0.809
ENSPPYG00000013626
Pongo pygmaeus
ENSPPYG00000013626
I
0.910
ENSPPYG00000019327
Pongo pygmaeus
ENSPPYG00000019327
I
0.979
HNRNPK
Pan troglodytes
ENSPTRG00000021061
I
0.979
HNRNPK
Pteropus vampyrus
ENSPVAG00000009078
I
0.931
ENSRNOG00000013016
Rattus norvegicus
ENSRNOG00000013016
I
0.856
Hnrnpk
Rattus norvegicus
ENSRNOG00000019113
I
0.979
D3ZJL5_RAT
Rattus norvegicus
ENSRNOG00000029014
I
0.856
HNRNPK
Tupaia belangeri
ENSTBEG00000001289
I
0.957
HNRNPK
Taeniopygia guttata
ENSTGUG00000003138
I
0.979
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000006005
I
0.904
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000007554
I
0.782
HNRNPK
Takifugu rubripes
ENSTRUG00000000535
I
0.920
HNRNPK
Takifugu rubripes
ENSTRUG00000010659
I
0.904
HNRNPK
Tarsius syrichta
ENSTSYG00000001196
I
0.979
HNRNPK
Tursiops truncatus
ENSTTRG00000016693
I
0.984
hnrnpk
Xenopus tropicalis
ENSXETG00000011722
I
0.931