CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TEX13A
(
Pan troglodytes
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSPTRG00000022142
T26741_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000047321
RanBP ZF
376
400
RPGDWDCPWCNAVNFSRRDTCFDCG
Links
Other
RanBP ZF
family RBPs
Other
Pan troglodytes
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
113249
Helobdella robusta
113249
I
0.000
AAH81025
Xenopus laevis
AAH81025
I
0.000
AAH97714
Xenopus laevis
AAH97714
I
0.000
AAI08448
Xenopus laevis
AAI08448
I
0.000
AGAP006755
Anopheles gambiae
AGAP006755
I
0.000
amel4_ncbi_hmm14979
Apis mellifera
amel4_ncbi_hmm14979
I
0.000
Ame_R005855
Ailuropoda melanoleuca
Ame_R005855
I
0.000
BGIBMGA011988
Bombyx mori
BGIBMGA011988
I
0.000
CAA30972
Xenopus laevis
CAA30972
I
0.000
Cucsa.127380
Cucumis sativus
Cucsa.127380
I
0.000
DGIL_AUG5s10040g3t1
Acyrtosiphon pisum
DGIL_AUG5s10040g3t1
I
0.000
DGIL_AUG5s10626g1p1t1
Acyrtosiphon pisum
DGIL_AUG5s10626g1p1t1
I
0.000
SNRNP70
Anolis carolinensis
ENSACAG00000013276
I
0.000
RU17_BOVIN
Bos taurus
ENSBTAG00000001996
I
0.000
SNRNP70
Canis familiaris
ENSCAFG00000003711
I
0.000
LOC100392779
Callithrix jacchus
ENSCJAG00000000193
I
0.000
SNRNP70
Cavia porcellus
ENSCPOG00000019589
I
0.000
ENSCSAVG00000010109
Ciona savignyi
ENSCSAVG00000010109
I
0.000
snrnp70
Danio rerio
ENSDARG00000077126
I
0.000
Snrnp70
Dipodomys ordii
ENSDORG00000010228
I
0.000
LOC100054907
Equus caballus
ENSECAG00000013936
I
0.000
SNRNP70
Erinaceus europaeus
ENSEEUG00000005666
I
0.000
SNRNP70
Felis catus
ENSFCAG00000006683
I
0.000
SNRNP70
Homo sapiens
ENSG00000104852
D
0.000
SNRNP70
Gasterosteus aculeatus
ENSGACG00000000448
I
0.000
SNRNP70
Gorilla gorilla
ENSGGOG00000008245
I
0.000
SNRNP70
Loxodonta africana
ENSLAFG00000028536
I
0.000
SNRNP70
Macropus eugenii
ENSMEUG00000015650
I
0.000
SNRNP70
Myotis lucifugus
ENSMLUG00000011766
I
0.000
SNRNP70
Macaca mulatta
ENSMMUG00000004928
I
0.000
SNRNP70
Monodelphis domestica
ENSMODG00000023381
I
0.000
Snrnp70
Mus musculus
ENSMUSG00000063511
I
0.000
SNRNP70
Ornithorhynchus anatinus
ENSOANG00000005213
I
0.000
SNRNP70
Oryctolagus cuniculus
ENSOCUG00000015081
I
0.000
SNRNP70
Oryzias latipes
ENSORLG00000017158
I
0.000
ENSPPYG00000010234
Pongo pygmaeus
ENSPPYG00000010234
I
0.000
SNRNP70
Pan troglodytes
ENSPTRG00000011277
I
0.000
SNRNP70
Pteropus vampyrus
ENSPVAG00000009578
I
0.000
Snrnp70
Rattus norvegicus
ENSRNOG00000020763
I
0.000
SNRNP70
Takifugu rubripes
ENSTRUG00000009202
I
0.000
SNRNP70
Tursiops truncatus
ENSTTRG00000017099
I
0.000
snrnp70
Xenopus tropicalis
ENSXETG00000022919
I
0.000
e_gw.153.81.1
Nematostella vectensis
e_gw.153.81.1
I
0.000
snRNP70K
Drosophila melanogaster
FBgn0016978
D
0.000
GA21298-RA
Drosophila pseudoobscura
FBgn0081286
I
0.000
GF14460
Drosophila ananassae
FBgn0091487
I
0.000
GG23559
Drosophila erecta
FBgn0115705
I
0.000
GH13577
Drosophila grimshawi
FBgn0121053
I
0.000
GI24161
Drosophila mojavensis
FBgn0146884
I
0.000
GM13669
Drosophila sechellia
FBgn0168600
I
0.000
GD22521
Drosophila simulans
FBgn0193923
I
0.000
GJ21434
Drosophila virilis
FBgn0208560
I
0.000
GK18098
Drosophila willistoni
FBgn0220097
I
0.000
GE18384
Drosophila yakuba
FBgn0235804
I
0.000
IGS.gm_29_00073
Chlorella NC64A
IGS.gm_29_00073
I
0.000
ISCW021751
Ixodes scapularis
ISCW021751
I
0.000
nasonia_NCBI_hmm246143
Nasonia vitripennis
nasonia_NCBI_hmm246143
I
0.000
NCBI_GNO_5600020
Daphnia pulex
NCBI_GNO_5600020
I
0.000
P09406
Xenopus laevis
P09406
I
0.000
PHUM022320
Pediculus humanus
PHUM022320
I
0.000
A9PI24_POPTR
Populus trichocarpa
POPTR_0005s12580
I
0.000
B9HEV8_POPTR
Populus trichocarpa
POPTR_0007s12690
I
0.000
XP_001193416.1
Strongylocentrotus purpuratus
XP_001193416.1
I
0.000
XP_781203.2
Strongylocentrotus purpuratus
XP_781203.2
I
0.000