SNRNP70 (Anolis carolinensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSACAG00000013276 T34709_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SNRNP70
M068_0.6 		Homo sapiens RWUCAAG RNAcompete
Ray et al.(2013)
RNCMPT00070 		0.958
snRNP70K
M134_0.6 		Drosophila melanogaster AUCAHG RNAcompete
Ray et al.(2013)
RNCMPT00143 		0.775
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000013057 RRM 105 175

Links

Other RRM family RBPs
Other Anolis carolinensis RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
113249 Helobdella robusta 113249 I 0.711
AAH81025 Xenopus laevis AAH81025 I 0.846
AAH97714 Xenopus laevis AAH97714 I 0.846
AAI08448 Xenopus laevis AAI08448 I 0.846
AGAP006755 Anopheles gambiae AGAP006755 I 0.817
amel4_ncbi_hmm14979 Apis mellifera amel4_ncbi_hmm14979 I 0.845
Ame_R005855 Ailuropoda melanoleuca Ame_R005855 I 0.958
BGIBMGA011988 Bombyx mori BGIBMGA011988 I 0.873
CAA30972 Xenopus laevis CAA30972 I 0.846
Cucsa.127380 Cucumis sativus Cucsa.127380 I 0.704
DGIL_AUG5s10040g3t1 Acyrtosiphon pisum DGIL_AUG5s10040g3t1 I 0.803
DGIL_AUG5s10626g1p1t1 Acyrtosiphon pisum DGIL_AUG5s10626g1p1t1 I 0.845
RU17_BOVIN Bos taurus ENSBTAG00000001996 I 0.958
SNRNP70 Canis familiaris ENSCAFG00000003711 I 0.958
LOC100392779 Callithrix jacchus ENSCJAG00000000193 I 0.958
SNRNP70 Cavia porcellus ENSCPOG00000019589 I 0.958
ENSCSAVG00000010109 Ciona savignyi ENSCSAVG00000010109 I 0.746
snrnp70 Danio rerio ENSDARG00000077126 I 0.944
Snrnp70 Dipodomys ordii ENSDORG00000010228 I 0.958
LOC100054907 Equus caballus ENSECAG00000013936 I 0.718
SNRNP70 Erinaceus europaeus ENSEEUG00000005666 I 0.958
SNRNP70 Felis catus ENSFCAG00000006683 I 0.718
SNRNP70 Homo sapiens ENSG00000104852 D 0.958
SNRNP70 Gasterosteus aculeatus ENSGACG00000000448 I 0.944
SNRNP70 Gorilla gorilla ENSGGOG00000008245 I 0.958
SNRNP70 Loxodonta africana ENSLAFG00000028536 I 0.958
SNRNP70 Macropus eugenii ENSMEUG00000015650 I 0.805
SNRNP70 Myotis lucifugus ENSMLUG00000011766 I 0.958
SNRNP70 Macaca mulatta ENSMMUG00000004928 I 0.958
SNRNP70 Monodelphis domestica ENSMODG00000023381 I 0.718
Snrnp70 Mus musculus ENSMUSG00000063511 I 0.958
SNRNP70 Ornithorhynchus anatinus ENSOANG00000005213 I 0.958
SNRNP70 Oryctolagus cuniculus ENSOCUG00000015081 I 0.958
SNRNP70 Oryzias latipes ENSORLG00000017158 I 0.746
ENSPPYG00000010234 Pongo pygmaeus ENSPPYG00000010234 I 0.958
SNRNP70 Pan troglodytes ENSPTRG00000011277 I 0.958
SNRNP70 Pteropus vampyrus ENSPVAG00000009578 I 0.859
Snrnp70 Rattus norvegicus ENSRNOG00000020763 I 0.958
SNRNP70 Spermophilus tridecemlineatus ENSSTOG00000013988 I 0.958
SNRNP70 Takifugu rubripes ENSTRUG00000009202 I 0.930
SNRNP70 Tursiops truncatus ENSTTRG00000017099 I 0.958
snrnp70 Xenopus tropicalis ENSXETG00000022919 I 0.972
e_gw.153.81.1 Nematostella vectensis e_gw.153.81.1 I 0.789
snRNP70K Drosophila melanogaster FBgn0016978 D 0.775
GA21298-RA Drosophila pseudoobscura FBgn0081286 I 0.775
GF14460 Drosophila ananassae FBgn0091487 I 0.775
GG23559 Drosophila erecta FBgn0115705 I 0.775
GH13577 Drosophila grimshawi FBgn0121053 I 0.775
GI24161 Drosophila mojavensis FBgn0146884 I 0.789
GM13669 Drosophila sechellia FBgn0168600 I 0.775
GD22521 Drosophila simulans FBgn0193923 I 0.775
GJ21434 Drosophila virilis FBgn0208560 I 0.775
GK18098 Drosophila willistoni FBgn0220097 I 0.775
GE18384 Drosophila yakuba FBgn0235804 I 0.775
IGS.gm_29_00073 Chlorella NC64A IGS.gm_29_00073 I 0.732
ISCW021751 Ixodes scapularis ISCW021751 I 0.859
nasonia_NCBI_hmm246143 Nasonia vitripennis nasonia_NCBI_hmm246143 I 0.845
NCBI_GNO_5600020 Daphnia pulex NCBI_GNO_5600020 I 0.789
P09406 Xenopus laevis P09406 I 0.846
PHUM022320 Pediculus humanus PHUM022320 I 0.845
A9PI24_POPTR Populus trichocarpa POPTR_0005s12580 I 0.718
B9HEV8_POPTR Populus trichocarpa POPTR_0007s12690 I 0.704
XP_001193416.1 Strongylocentrotus purpuratus XP_001193416.1 I 0.789
XP_781203.2 Strongylocentrotus purpuratus XP_781203.2 I 0.789