CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000001244
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000001244
T38615_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000001140
RRM
104
172
LLLSNLDFRVSDADIQQLFAEFGPLKHAAVHYDRSGRSLGTAHVHFERKADALEARKQYNGVPLDVNRR
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
81 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH74336
Xenopus laevis
AAH74336
N
0.814
AAH92013
Xenopus laevis
AAH92013
N
0.814
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.814
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.814
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.814
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.814
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.814
tho4
Danio rerio
ENSDARG00000077732
N
0.814
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.814
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.814
THOC4
Homo sapiens
ENSG00000183684
N
0.814
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.757
THOC4
Gallus gallus
ENSGALG00000007237
N
0.814
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.814
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.814
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.814
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.814
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.814
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.814
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.814
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.814
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.786
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.814
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.814
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.814
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.826
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.814
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.786
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.814
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.814
estExt_Genewise1.C_7200001
Capitella teleta
estExt_Genewise1.C_7200001
N
0.000
e_gw.394.68.1
Branchiostoma floridae
e_gw.394.68.1
N
0.743
e_gw.5.817.1
Branchiostoma floridae
e_gw.5.817.1
N
0.743
fgeneshTA2_pg.C_scaffold_2000899
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_2000899
N
0.000
gw1.3495.5.1
Capitella teleta
gw1.3495.5.1
N
0.000
gw1.674.7.1
Capitella teleta
gw1.674.7.1
N
0.000
Q58EA2
Xenopus laevis
Q58EA2
N
0.814
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.814