ENSOANG00000008789 (Ornithorhynchus anatinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOANG00000008789 T39508_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.970
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.970
NONO
M309_0.6 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
490_12403470 		0.744
NONO
M307_0.6 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
488_9001221 		0.744
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000014004 RRM 29 93
ENSOANP00000014004 RRM 103 170
ENSOANP00000014005 RRM 17 84

Links

Other RRM family RBPs
Other Ornithorhynchus anatinus RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.142970 Cucumis sativus Cucsa.142970 N 0.000
Cucsa.242740 Cucumis sativus Cucsa.242740 N 0.000
Cucsa.263980 Cucumis sativus Cucsa.263980 N 0.000
GRMZM2G071034 Zea mays GRMZM2G071034 N 0.000
GRMZM2G110402 Zea mays GRMZM2G110402 N 0.000
GRMZM2G124476 Zea mays GRMZM2G124476 N 0.000
GRMZM2G151689 Zea mays GRMZM2G151689 N 0.000
GSVIVG00001369001 Vitis vinifera GSVIVG00001369001 N 0.000
GSVIVG00025360001 Vitis vinifera GSVIVG00025360001 N 0.000
GSVIVG00033508001 Vitis vinifera GSVIVG00033508001 N 0.000
LOC_Os02g10080 Oryza sativa LOC_Os02g10080 N 0.000
LOC_Os04g57010 Oryza sativa LOC_Os04g57010 N 0.000
PDK_20s1321721g007 Phoenix dactylifera PDK_20s1321721g007 N 0.000
B9GLM3_POPTR Populus trichocarpa POPTR_0001s05070 N 0.000
B9GYL2_POPTR Populus trichocarpa POPTR_0003s21780 N 0.000
Sb10g024330 Sorghum bicolor Sb10g024330 N 0.000