RBMX2 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000007672 T42054_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000010488 RRM 37 107

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

108 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
145168 Helobdella robusta 145168 N 0.732
AAEL002461 Aedes aegypti AAEL002461 N 0.775
AAH56844 Xenopus laevis AAH56844 N 0.716
AGAP000977 Anopheles gambiae AGAP000977 N 0.775
Ame_R006638 Ailuropoda melanoleuca Ame_R006638 N 0.903
Aqu1.200557 Amphimedon queenslandica Aqu1.200557 N 0.803
Aqu1.228439 Amphimedon queenslandica Aqu1.228439 N 0.803
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.704
Bm1_02690 Brugia malayi Bm1_02690 N 0.761
C30B5.4 Caenorhabditis elegans C30B5.4 N 0.732
An07g05140 Aspergillus niger CADANGAG00005786 N 0.704
CAOG_00327 Capsaspora owczarzaki CAOG_00327 N 0.761
CBG02589 Caenorhabditis briggsae CBG02589 N 0.718
CBN24057 Caenorhabditis brenneri CBN24057 N 0.704
CPIJ015641 Culex quinquefasciatus CPIJ015641 N 0.703
CpipJ_CPIJ015641 Culex pipiens CpipJ_CPIJ015641 N 0.703
CRE26315 Caenorhabditis remanei CRE26315 N 0.704
DGIL_AUG5s13597g2t1 Acyrtosiphon pisum DGIL_AUG5s13597g2t1 N 0.761
RBMX2 Anolis carolinensis ENSACAG00000008819 N 0.903
LOC534630 Bos taurus ENSBTAG00000006252 N 0.845
LOC613705 Bos taurus ENSBTAG00000014771 N 0.845
RBMX2 Canis familiaris ENSCAFG00000018770 N 0.878
ENSCING00000015467 Ciona intestinalis ENSCING00000015467 N 0.718
LOC100388331 Callithrix jacchus ENSCJAG00000002436 N 0.903
RBMX2 Cavia porcellus ENSCPOG00000006640 N 0.889
ENSCSAVG00000001047 Ciona savignyi ENSCSAVG00000001047 N 0.789
rbmx2 Danio rerio ENSDARG00000044380 N 0.958
LOC100058600 Equus caballus ENSECAG00000008257 N 0.903
RBMX2 Erinaceus europaeus ENSEEUG00000000839 N 0.861
RBMX2 Echinops telfairi ENSETEG00000001763 N 0.875
RBMX2 Homo sapiens ENSG00000134597 N 0.903
RBMX2 Gasterosteus aculeatus ENSGACG00000001855 N 0.901
RBMX2 Gallus gallus ENSGALG00000004025 N 0.875
ENSGGOG00000016146 Gorilla gorilla ENSGGOG00000016146 N 0.889
RBMX2 Gorilla gorilla ENSGGOG00000023687 N 0.903
ENSGGOG00000026106 Gorilla gorilla ENSGGOG00000026106 N 0.861
RBMX2 Loxodonta africana ENSLAFG00000017625 N 0.865
ENSLAFG00000028277 Loxodonta africana ENSLAFG00000028277 N 0.859
RBMX2 Macropus eugenii ENSMEUG00000010913 N 0.889
RBMX2 Meleagris gallopavo ENSMGAG00000001801 N 0.833
RBMX2 Microcebus murinus ENSMICG00000015139 N 0.903
ENSMLUG00000010298 Myotis lucifugus ENSMLUG00000010298 N 0.903
ENSMLUG00000017095 Myotis lucifugus ENSMLUG00000017095 N 0.915
ENSMMUG00000001001 Macaca mulatta ENSMMUG00000001001 N 0.792
RBMX2 Macaca mulatta ENSMMUG00000008389 N 0.903
XP_001110036.1 Macaca mulatta ENSMMUG00000020845 N 0.889
ENSMODG00000011981 Monodelphis domestica ENSMODG00000011981 N 0.803
XM_001377711.1 Monodelphis domestica ENSMODG00000012002 N 0.903
ENSMODG00000019800 Monodelphis domestica ENSMODG00000019800 N 0.889
Rbmx2 Mus musculus ENSMUSG00000031107 N 0.889
RBMX2 Ornithorhynchus anatinus ENSOANG00000001362 N 0.824
RBMX2 Oryctolagus cuniculus ENSOCUG00000011809 N 0.863
ENSOCUG00000020937 Oryctolagus cuniculus ENSOCUG00000020937 N 0.784
ENSOGAG00000006237 Otolemur garnettii ENSOGAG00000006237 N 0.903
ENSOGAG00000009060 Otolemur garnettii ENSOGAG00000009060 N 0.861
RBMX2 Oryzias latipes ENSORLG00000013183 N 0.887
RBMX2 Procavia capensis ENSPCAG00000012903 N 0.861
ENSPPYG00000020717 Pongo pygmaeus ENSPPYG00000020717 N 0.875
XR_023755.1 Pan troglodytes ENSPTRG00000022269 N 0.875
RBMX2 Pteropus vampyrus ENSPVAG00000004425 N 0.903
Rbmx2 Rattus norvegicus ENSRNOG00000007371 N 0.889
RBMX2 Sorex araneus ENSSARG00000007350 N 0.873
RBMX2 Spermophilus tridecemlineatus ENSSTOG00000015391 N 0.875
RBMX2 Taeniopygia guttata ENSTGUG00000005239 N 0.778
RBMX2 Takifugu rubripes ENSTRUG00000001699 N 0.986
RBMX2 Tarsius syrichta ENSTSYG00000010611 N 0.831
RBMX2 Tursiops truncatus ENSTTRG00000016210 N 0.903
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.704
estExt_fgenesh1_pg.C_410012 Monosiga brevicollis estExt_fgenesh1_pg.C_410012 N 0.718
estExt_fgenesh2_pg.C_1800064 Branchiostoma floridae estExt_fgenesh2_pg.C_1800064 N 0.803
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.859
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.704
e_gw1.98.15.1 Volvox carteri e_gw1.98.15.1 N 0.718
CG10466 Drosophila melanogaster FBgn0032822 N 0.803
GA10331-RA Drosophila pseudoobscura FBgn0070389 N 0.859
GF14433 Drosophila ananassae FBgn0091460 N 0.831
GG21207 Drosophila erecta FBgn0113387 N 0.817
GH13830 Drosophila grimshawi FBgn0121306 N 0.831
GI11259 Drosophila mojavensis FBgn0134020 N 0.873
GI11260 Drosophila mojavensis FBgn0134021 N 0.873
GI20215 Drosophila mojavensis FBgn0142951 N 0.873
GL26176 Drosophila persimilis FBgn0163758 N 0.859
GM17378 Drosophila sechellia FBgn0172288 N 0.803
GD24233 Drosophila simulans FBgn0195582 N 0.803
GJ13600 Drosophila virilis FBgn0200822 N 0.887
GK14925 Drosophila willistoni FBgn0216930 N 0.831
GE13281 Drosophila yakuba FBgn0230967 N 0.803
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.789
GSPATP00026936001 Paramecium tetraurelia GSPATP00026936001 N 0.718
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.718
gw.130.169.1 Nematostella vectensis gw.130.169.1 N 0.817
gw1.1.2244.1 Trichoplax adhaerens gw1.1.2244.1 N 0.761
gw1.1.3012.1 Tremella mesenterica gw1.1.3012.1 N 0.704
gw1.462.53.1 Capitella teleta gw1.462.53.1 N 0.803
ISCW009356 Ixodes scapularis ISCW009356 N 0.718
nasonia_NCBI_hmm382923 Nasonia vitripennis nasonia_NCBI_hmm382923 N 0.817
NCLIV_024340 Neospora caninum NCLIV_024340 N 0.704
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.704
PHUM617480 Pediculus humanus PHUM617480 N 0.803
PITG_06351 Phytophthora infestans PITG_06351 N 0.704
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.789
SPPG_01752 Spizellomyces punctatus SPPG_01752 N 0.703
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.704
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.704
WUBG_13107 Wuchereria bancrofti WUBG_13107 N 0.761
XP_001180915.1 Strongylocentrotus purpuratus XP_001180915.1 N 0.859
XP_002164481.1 Hydra magnipapillata XP_002164481.1 N 0.817
XP_791635.2 Strongylocentrotus purpuratus XP_791635.2 N 0.859