e_gw1.12.826.1 (Trichoderma virens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.12.826.1 T49743_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.12.826.1 RRM 35 105

Links

Other RRM family RBPs
Other Trichoderma virens RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.986
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.972
NCU02467 Neurospora crassa NCU02467 N 0.958
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.958
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.958
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.944
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.944
e_gw1.18.2245.1 Nectria haematococca e_gw1.18.2245.1 N 0.944
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.930
CHGG_06716 Chaetomium globosum CHGG_06716 N 0.930
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.915
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.915
FGSG_09419 Fusarium graminearum FGSG_09419 N 0.887
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.873
VDBG_02287 Verticillium albo atrum VDBG_02287 N 0.859
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.859
VDAG_02758 Verticillium dahliae VDAG_02758 N 0.859
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.845
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.845
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.817
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.817
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.817
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.817
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.803
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.789
AB08288.1 Alternaria brassicicola AB08288.1 N 0.789
An07g05140 Aspergillus niger CADANGAG00005786 N 0.789
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.789
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.775
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.775
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.775
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.775
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.775
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.775
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.761
TERG_07863 Trichophyton rubrum TERG_07863 N 0.761
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.761
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.761
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.761
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.761
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.761
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.761
MCYG_01624 Microsporum canis MCYG_01624 N 0.761
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.761
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.746
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.746
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.746
estExt_fgenesh1_pg.C_chr_10724 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10724 N 0.718
SAKL0F04400g Lachancea kluyveri SAKL0F04400g N 0.718
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.718
fgenesh1_pm.C_scaffold_1000287 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_1000287 N 0.718
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.704
RBMX2 Tetraodon nigroviridis ENSTNIG00000007672 N 0.704
KLLA0D13420g Kluyveromyces lactis KLLA0D13420g N 0.704