SS1G_03313 (Sclerotinia sclerotiorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SS1G_03313 T30965_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_03313 RRM 35 105

Links

Other RRM family RBPs
Other Sclerotinia sclerotiorum RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.972
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.845
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.845
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.831
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.831
An07g05140 Aspergillus niger CADANGAG00005786 N 0.831
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.831
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.831
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.831
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.817
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.817
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.817
TERG_07863 Trichophyton rubrum TERG_07863 N 0.817
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.817
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.817
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.817
MCYG_01624 Microsporum canis MCYG_01624 N 0.817
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.803
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.803
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.803
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.803
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.803
estExt_fgenesh1_pg.C_chr_10724 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10724 N 0.789
e_gw1.18.2245.1 Nectria haematococca e_gw1.18.2245.1 N 0.789
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.789
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.775
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.775
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.775
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.775
fgenesh1_pm.C_scaffold_1000287 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_1000287 N 0.775
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.775
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.775
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.775
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.761
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.761
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.761
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.761
FGSG_09419 Fusarium graminearum FGSG_09419 N 0.761
NCU02467 Neurospora crassa NCU02467 N 0.761
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.746
CHGG_06716 Chaetomium globosum CHGG_06716 N 0.746
SAKL0F04400g Lachancea kluyveri SAKL0F04400g N 0.746
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.746
AB08288.1 Alternaria brassicicola AB08288.1 N 0.746
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.746
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.732
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.732
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.732
VDBG_02287 Verticillium albo atrum VDBG_02287 N 0.732
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.732
KLTH0F13442g Kluyveromyces thermotolerans KLTH0F13442g N 0.732
VDAG_02758 Verticillium dahliae VDAG_02758 N 0.732
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.732
CAGL0J01914g Candida glabrata CAGL0J01914g N 0.718
estExt_fgenesh1_pg.C_410012 Monosiga brevicollis estExt_fgenesh1_pg.C_410012 N 0.718
RBMX2 Tetraodon nigroviridis ENSTNIG00000007672 N 0.704
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.704
XP_791635.2 Strongylocentrotus purpuratus XP_791635.2 N 0.704
gw1.4.2036.1 Heterobasidion annosum gw1.4.2036.1 N 0.704
gw1.4.1321.1 Pleurotus ostreatus gw1.4.1321.1 N 0.704
XP_001180915.1 Strongylocentrotus purpuratus XP_001180915.1 N 0.704
estExt_fgenesh3_pg.C_500008 Postia placenta estExt_fgenesh3_pg.C_500008 N 0.704