AAI28969 (Xenopus laevis)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 AAI28969 T61759_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAI28969 S1 78 161

Links

Other S1 family RBPs
Other Xenopus laevis RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
97663 Helobdella robusta 97663 N 0.000
AAEL005114 Aedes aegypti AAEL005114 N 0.000
AAEL015263 Aedes aegypti AAEL015263 N 0.000
AAH74336 Xenopus laevis AAH74336 N 0.000
AAH92013 Xenopus laevis AAH92013 N 0.000
AGAP006733 Anopheles gambiae AGAP006733 N 0.000
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.000
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.000
Aqu1.225634 Amphimedon queenslandica Aqu1.225634 N 0.000
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.000
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.000
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.000
DGIL_AUG5s14095g4t3 Acyrtosiphon pisum DGIL_AUG5s14095g4t3 N 0.000
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.000
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.000
ENSCING00000013568 Ciona intestinalis ENSCING00000013568 N 0.000
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.000
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.000
Q8MY63_CIOSA Ciona savignyi ENSCSAVG00000003324 N 0.000
tho4 Danio rerio ENSDARG00000077732 N 0.000
LOC100055097 Equus caballus ENSECAG00000018754 N 0.000
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.000
THOC4 Echinops telfairi ENSETEG00000016596 N 0.000
THOC4 Homo sapiens ENSG00000183684 N 0.000
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.000
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.000
THOC4 Gallus gallus ENSGALG00000007237 N 0.000
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.000
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.000
THOC4 Macropus eugenii ENSMEUG00000002210 N 0.000
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.000
THOC4 Microcebus murinus ENSMICG00000017403 N 0.000
ENSMLUG00000001217 Myotis lucifugus ENSMLUG00000001217 N 0.000
ENSMLUG00000001244 Myotis lucifugus ENSMLUG00000001244 N 0.000
ENSMLUG00000002626 Myotis lucifugus ENSMLUG00000002626 N 0.000
ENSMLUG00000002669 Myotis lucifugus ENSMLUG00000002669 N 0.000
ENSMLUG00000004521 Myotis lucifugus ENSMLUG00000004521 N 0.000
ENSMLUG00000004992 Myotis lucifugus ENSMLUG00000004992 N 0.000
ENSMLUG00000006641 Myotis lucifugus ENSMLUG00000006641 N 0.000
ENSMLUG00000007513 Myotis lucifugus ENSMLUG00000007513 N 0.000
ENSMLUG00000007617 Myotis lucifugus ENSMLUG00000007617 N 0.000
ENSMLUG00000007634 Myotis lucifugus ENSMLUG00000007634 N 0.000
ENSMLUG00000008410 Myotis lucifugus ENSMLUG00000008410 N 0.000
ENSMLUG00000008923 Myotis lucifugus ENSMLUG00000008923 N 0.000
ENSMLUG00000009247 Myotis lucifugus ENSMLUG00000009247 N 0.000
ENSMLUG00000009447 Myotis lucifugus ENSMLUG00000009447 N 0.000
ENSMLUG00000009449 Myotis lucifugus ENSMLUG00000009449 N 0.000
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.000
ENSMLUG00000009822 Myotis lucifugus ENSMLUG00000009822 N 0.000
ENSMLUG00000010127 Myotis lucifugus ENSMLUG00000010127 N 0.000
ENSMLUG00000010456 Myotis lucifugus ENSMLUG00000010456 N 0.000
ENSMLUG00000010927 Myotis lucifugus ENSMLUG00000010927 N 0.000
ENSMLUG00000011212 Myotis lucifugus ENSMLUG00000011212 N 0.000
ENSMLUG00000011599 Myotis lucifugus ENSMLUG00000011599 N 0.000
ENSMLUG00000013041 Myotis lucifugus ENSMLUG00000013041 N 0.000
ENSMLUG00000013085 Myotis lucifugus ENSMLUG00000013085 N 0.000
ENSMLUG00000014480 Myotis lucifugus ENSMLUG00000014480 N 0.000
ENSMLUG00000015043 Myotis lucifugus ENSMLUG00000015043 N 0.000
ENSMLUG00000015142 Myotis lucifugus ENSMLUG00000015142 N 0.000
ENSMLUG00000016194 Myotis lucifugus ENSMLUG00000016194 N 0.000
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.000
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.000
Thoc4 Mus musculus ENSMUSG00000025134 N 0.000
Refbp2 Mus musculus ENSMUSG00000060244 N 0.000
Gm5698 Mus musculus ENSMUSG00000086151 N 0.000
Gm5699 Mus musculus ENSMUSG00000087346 N 0.000
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.000
THOC4 Ochotona princeps ENSOPRG00000005551 N 0.000
ENSORLG00000001620 Oryzias latipes ENSORLG00000001620 N 0.000
THOC4 Oryzias latipes ENSORLG00000012331 N 0.000
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.000
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.000
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.000
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.000
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.000
ENSTBEG00000013201 Tupaia belangeri ENSTBEG00000013201 N 0.000
THOC4 Taeniopygia guttata ENSTGUG00000003513 N 0.000
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.000
ENSTNIG00000014136 Tetraodon nigroviridis ENSTNIG00000014136 N 0.000
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.000
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.000
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.000
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.000
estExt_fgenesh1_pg.C_6740009 Capitella teleta estExt_fgenesh1_pg.C_6740009 N 0.000
estExt_Genewise1.C_7200001 Capitella teleta estExt_Genewise1.C_7200001 N 0.000
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.000
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.000
Aly Drosophila melanogaster FBgn0010774 N 0.000
aly Drosophila yakuba FBgn0068000 N 0.000
GA10707-RA Drosophila pseudoobscura FBgn0070763 N 0.000
GF17326 Drosophila ananassae FBgn0094344 N 0.000
GG10124 Drosophila erecta FBgn0102435 N 0.000
GH18594 Drosophila grimshawi FBgn0126061 N 0.000
GI23076 Drosophila mojavensis FBgn0145803 N 0.000
GL12678 Drosophila persimilis FBgn0150284 N 0.000
GM10513 Drosophila sechellia FBgn0165460 N 0.000
GD19510 Drosophila simulans FBgn0191006 N 0.000
GJ22697 Drosophila virilis FBgn0209801 N 0.000
GK12741 Drosophila willistoni FBgn0214750 N 0.000
fgeneshTA2_pg.C_scaffold_2000899 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_2000899 N 0.000
ISCW001860 Ixodes scapularis ISCW001860 N 0.000
nasonia_NCBI_hmm488134 Nasonia vitripennis nasonia_NCBI_hmm488134 N 0.000
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.000
PHUM023420 Pediculus humanus PHUM023420 N 0.000
Q58EA2 Xenopus laevis Q58EA2 N 0.000
Q6GLW1 Xenopus laevis Q6GLW1 N 0.000
Smp_108820 Schistosoma mansoni Smp_108820 N 0.000
SNAPOd2T00000646001 Oikopleura dioica SNAPOd2T00000646001 N 0.000
SNAPOd2T00000651001 Oikopleura dioica SNAPOd2T00000651001 N 0.000
XP_001185635.1 Strongylocentrotus purpuratus XP_001185635.1 N 0.000
XP_002155396.1 Hydra magnipapillata XP_002155396.1 N 0.000
XP_782040.2 Strongylocentrotus purpuratus XP_782040.2 N 0.000