fus (Xenopus tropicalis)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSXETG00000001951 T25683_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FUS
M316_0.6 		Homo sapiens GGUG SELEX
Cook et al.(2011)
637_11098054 		0.973
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000004150 RRM 51 129
ENSXETP00000004150 RanBP ZF 187 218
ENSXETP00000004156 RRM 298 376
ENSXETP00000004156 RanBP ZF 434 465
ENSXETP00000004177 RRM 292 370
ENSXETP00000004177 RanBP ZF 428 459

Links

Other RanBP ZF,RRM family RBPs
Other Xenopus tropicalis RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FUS Homo sapiens ENSG00000089280 D 0.973
ENSRNOG00000024836 Rattus norvegicus ENSRNOG00000024836 I 0.739
Fus Rattus norvegicus ENSRNOG00000023360 I 0.964
Taf15 Rattus norvegicus ENSRNOG00000010604 I 0.784
TAF15 Pteropus vampyrus ENSPVAG00000003952 I 0.784
FUS Pteropus vampyrus ENSPVAG00000003097 I 0.973
TAF15 Pan troglodytes ENSPTRG00000009026 I 0.784
FUS Pan troglodytes ENSPTRG00000008038 I 0.973
ENSPPYG00000008194 Pongo pygmaeus ENSPPYG00000008194 I 0.766
ENSPPYG00000007311 Pongo pygmaeus ENSPPYG00000007311 I 0.730
TAF15 Oryzias latipes ENSORLG00000011382 I 0.775
FUS Oryctolagus cuniculus ENSOCUG00000021526 I 0.973
TAF15 Oryctolagus cuniculus ENSOCUG00000002838 I 0.784
TAF15 Ornithorhynchus anatinus ENSOANG00000014273 I 0.766
FUS Ornithorhynchus anatinus ENSOANG00000005606 I 0.964
Fus Mus musculus ENSMUSG00000030795 I 0.973
FUS Loxodonta africana ENSLAFG00000001643 I 0.892
D3ZSJ6_RAT Rattus norvegicus ENSRNOG00000028611 I 0.937
AAH81071 Xenopus laevis AAH81071 I 0.739
AAH77935 Xenopus laevis AAH77935 I 0.748
AAH74437 Xenopus laevis AAH74437 I 0.982
AAH44319 Xenopus laevis AAH44319 I 0.982
Ame_R012008 Ailuropoda melanoleuca Ame_R012008 I 0.784
TAF15 Tursiops truncatus ENSTTRG00000014145 I 0.784
FUS Tarsius syrichta ENSTSYG00000011757 I 0.919
TAF15 Takifugu rubripes ENSTRUG00000007798 I 0.748
FUS Tetraodon nigroviridis ENSTNIG00000011303 I 0.874
TAF15 Tetraodon nigroviridis ENSTNIG00000004057 I 0.757
TAF15 Taeniopygia guttata ENSTGUG00000004702 I 0.811
TAF15 Sus scrofa ENSSSCG00000017707 I 0.784
FUS Sus scrofa ENSSSCG00000007759 I 0.973
TAF15 Sorex araneus ENSSARG00000012092 I 0.784
Taf15 Mus musculus ENSMUSG00000020680 I 0.784
TAF15 Monodelphis domestica ENSMODG00000019123 I 0.721
FUS Anolis carolinensis ENSACAG00000006776 I 0.973
ENSETEG00000015358 Echinops telfairi ENSETEG00000015358 I 0.865
FUS Erinaceus europaeus ENSEEUG00000004934 I 0.973
LOC100071562 Equus caballus ENSECAG00000000718 I 0.784
TAF15 Dasypus novemcinctus ENSDNOG00000006956 I 0.766
TAF15 Danio rerio ENSDARG00000070019 I 0.784
TAF15 Cavia porcellus ENSCPOG00000010259 I 0.757
LOC100391580 Callithrix jacchus ENSCJAG00000014961 I 0.784
LOC100395517 Callithrix jacchus ENSCJAG00000003169 I 0.973
ENSCJAG00000002807 Callithrix jacchus ENSCJAG00000002807 I 0.784
ENSCJAG00000002118 Callithrix jacchus ENSCJAG00000002118 I 0.712
FUS Choloepus hoffmanni ENSCHOG00000010780 I 0.865
TAF15 Canis familiaris ENSCAFG00000018176 I 0.784
FUS Canis familiaris ENSCAFG00000016862 I 0.973
TAF15 Bos taurus ENSBTAG00000006916 I 0.784
FUS_BOVIN Bos taurus ENSBTAG00000005757 I 0.973
TAF15 Homo sapiens ENSG00000172660 I 0.784
FUS Gasterosteus aculeatus ENSGACG00000014903 I 0.874
TAF15 Myotis lucifugus ENSMLUG00000002870 I 0.784
TAF15 Procavia capensis ENSPCAG00000009582 I 0.784
TAF15 Macaca mulatta ENSMMUG00000003305 I 0.784
FUS Macaca mulatta ENSMMUG00000019637 I 0.973
TAF15 Macropus eugenii ENSMEUG00000006009 I 0.730
FUS Macropus eugenii ENSMEUG00000000968 I 0.964
TAF15 Loxodonta africana ENSLAFG00000018332 I 0.784
TAF15 Gorilla gorilla ENSGGOG00000005693 I 0.784
FUS Gorilla gorilla ENSGGOG00000003707 I 0.973
FUS Monodelphis domestica ENSMODG00000001889 I 0.973
TAF15 Gallus gallus ENSGALG00000002060 I 0.811
TAF15 Meleagris gallopavo ENSMGAG00000003842 I 0.811
TAF15 Otolemur garnettii ENSOGAG00000011719 N 0.703
ENSMEUG00000013663 Macropus eugenii ENSMEUG00000013663 N 0.712
ENSMEUG00000008703 Macropus eugenii ENSMEUG00000008703 N 0.712
TAF15 Echinops telfairi ENSETEG00000001337 N 0.703
XM_001364468.1 Monodelphis domestica ENSMODG00000008679 N 0.703