RALYL (Choloepus hoffmanni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCHOG00000013228 T35340_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPC
M025_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00025 		0.812
RALY
M150_0.6 		Homo sapiens UUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00159 		0.797
HNRNPCL1
M158_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00167 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000011719 RRM 23 86

Links

Other RRM family RBPs
Other Choloepus hoffmanni RBPs

129 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PITG_22277 Phytophthora infestans PITG_22277 N 0.000
LOC_Os11g19910 Oryza sativa LOC_Os11g19910 N 0.000
LOC_Os11g38820 Oryza sativa LOC_Os11g38820 N 0.000
LOC_Os11g39950 Oryza sativa LOC_Os11g39950 N 0.000
LOC_Os12g33260 Oryza sativa LOC_Os12g33260 N 0.000
Sb04g021900 Sorghum bicolor Sb04g021900 N 0.000
Genemark.10526_g Serpula lacrymans Genemark.10526_g N 0.000
Genemark.10975_g Serpula lacrymans Genemark.10975_g N 0.000
Genemark.3014_g Serpula lacrymans Genemark.3014_g N 0.000
Genemark.4174_g Serpula lacrymans Genemark.4174_g N 0.000
LOC_Os11g18620 Oryza sativa LOC_Os11g18620 N 0.000
LOC_Os10g06430 Oryza sativa LOC_Os10g06430 N 0.000
CJA05016 Caenorhabditis japonica CJA05016 N 0.000
CJA17358 Caenorhabditis japonica CJA17358 N 0.000
CJA19095 Caenorhabditis japonica CJA19095 N 0.000
LOC_Os02g44180 Oryza sativa LOC_Os02g44180 N 0.000
LOC_Os03g44360 Oryza sativa LOC_Os03g44360 N 0.000
LOC_Os04g43950 Oryza sativa LOC_Os04g43950 N 0.000
LOC_Os06g31350 Oryza sativa LOC_Os06g31350 N 0.000
LOC_Os07g15080 Oryza sativa LOC_Os07g15080 N 0.000
LOC_Os07g17090 Oryza sativa LOC_Os07g17090 N 0.000
Genemark.8306_g Serpula lacrymans Genemark.8306_g N 0.000