RALY (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000002054 T37608_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RALY
M150_0.6 		Homo sapiens UUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00159 		0.969
HNRNPC
M025_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00025 		0.812
HNRNPCL1
M158_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00167 		0.734
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000003189 RRM 23 86
ENSGALP00000039622 RRM 25 88

Links

Other RRM family RBPs
Other Gallus gallus RBPs

131 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G12130 Arabidopsis thaliana AT3G12130-TAIR-G N 0.000
AT5G06770 Arabidopsis thaliana AT5G06770-TAIR-G N 0.000
XM_002884838.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3001010 N 0.000
XM_002873232.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000515 N 0.000
GSVIVG00001369001 Vitis vinifera GSVIVG00001369001 N 0.000
GSVIVG00025360001 Vitis vinifera GSVIVG00025360001 N 0.000
GSVIVG00033508001 Vitis vinifera GSVIVG00033508001 N 0.000