HNRNPC (Macropus eugenii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMEUG00000010928 T38239_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPC
M025_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00025 		0.984
HNRNPCL1
M158_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00167 		0.891
RALY
M150_0.6 		Homo sapiens UUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00159 		0.766
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMEUP00000009974 RRM 18 81

Links

Other RRM family RBPs
Other Macropus eugenii RBPs

130 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK10564.1 Cannabis sativa PK10564.1 I 0.000
MDP0000663428 Malus x domestica MDP0000663428 I 0.000
MDP0000155133 Malus x domestica MDP0000155133 I 0.000
LjSGA_031492.1 Lotus japonicus LjSGA_031492.1 I 0.000
Medtr3g094740 Medicago truncatula Medtr3g094740 I 0.000
Medtr3g094730 Medicago truncatula Medtr3g094730 I 0.000
Glyma18g02820.1 Glycine max Glyma18g02820.1 I 0.000
Glyma11g35600.1 Glycine max Glyma11g35600.1 I 0.000
Cucsa.239320 Cucumis sativus Cucsa.239320 I 0.000
29607.m000238 Ricinus communis 29607.m000238 I 0.000
B9HSK1_POPTR Populus trichocarpa POPTR_0010s19230 I 0.000
B9HHU6_POPTR Populus trichocarpa POPTR_0008s07250 I 0.000
XM_002881666.1 Arabidopsis lyrata fgenesh2_kg.4__2141__AT2G40290.1 I 0.000
AT2G40290 Arabidopsis thaliana AT2G40290-TAIR-G I 0.000
ppa008120m Prunus persica ppa008120m I 0.000
MDP0000273085 Malus x domestica MDP0000273085 N 0.000