XP_001109022.1 (Macaca mulatta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMMUG00000018813 T38961_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPC
M025_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00025 		0.969
HNRNPCL1
M158_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00167 		0.906
RALY
M150_0.6 		Homo sapiens UUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00159 		0.797
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000019437 RRM 18 81

Links

Other RRM family RBPs
Other Macaca mulatta RBPs

130 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPC Homo sapiens ENSG00000092199 D 0.969
RALY Homo sapiens ENSG00000125970 D 0.797
HNRNPCL1 Homo sapiens ENSG00000179172 D 0.906
HNRPC_RABIT Oryctolagus cuniculus ENSOCUG00000015029 I 0.969
XM_001153149.1 Pan troglodytes ENSPTRG00000034109 I 0.906
HNRNPCL1 Pteropus vampyrus ENSPVAG00000004499 I 0.969
RALYL Pteropus vampyrus ENSPVAG00000010821 I 0.828
RALY Pteropus vampyrus ENSPVAG00000015827 I 0.781
D4ACR0_RAT Rattus norvegicus ENSRNOG00000011621 I 0.969
ENSOCUG00000008851 Oryctolagus cuniculus ENSOCUG00000008851 I 0.953
Raly Rattus norvegicus ENSRNOG00000017405 I 0.812
D3ZW44_RAT Rattus norvegicus ENSRNOG00000042602 I 0.812
RALYL Sorex araneus ENSSARG00000002374 I 0.828
ENSSARG00000002763 Sorex araneus ENSSARG00000002763 I 0.781
HNRNPC Sorex araneus ENSSARG00000003711 I 0.969
ENSSSCG00000007274 Sus scrofa ENSSSCG00000007274 I 0.812
ENSSSCG00000007275 Sus scrofa ENSSSCG00000007275 I 0.812
RALYL Pan troglodytes ENSPTRG00000020381 I 0.828
RALY Pan troglodytes ENSPTRG00000013410 I 0.797
ENSOCUG00000013026 Oryctolagus cuniculus ENSOCUG00000013026 I 0.969
HNRNPC Otolemur garnettii ENSOGAG00000012543 I 0.969
ENSOPRG00000002800 Ochotona princeps ENSOPRG00000002800 I 0.953
RALY Ochotona princeps ENSOPRG00000008423 I 0.797
ENSORLG00000003144 Oryzias latipes ENSORLG00000003144 I 0.891
ENSORLG00000009999 Oryzias latipes ENSORLG00000009999 I 0.812
RALYL Oryzias latipes ENSORLG00000012719 I 0.828
RALYL Oryzias latipes ENSORLG00000017934 I 0.812
HNRNPCL1 Procavia capensis ENSPCAG00000003025 I 0.906
RALY Procavia capensis ENSPCAG00000016867 I 0.797
ENSPPYG00000001860 Pongo pygmaeus ENSPPYG00000001860 I 0.922
ENSPPYG00000005593 Pongo pygmaeus ENSPPYG00000005593 I 0.969
ENSPPYG00000010932 Pongo pygmaeus ENSPPYG00000010932 I 0.797
ENSPPYG00000018710 Pongo pygmaeus ENSPPYG00000018710 I 0.828
XR_022011.1 Pan troglodytes ENSPTRG00000006118 I 0.969
RALYL Taeniopygia guttata ENSTGUG00000011689 I 0.812
HNRNPC Tursiops truncatus ENSTTRG00000016055 I 0.969
RALY Vicugna pacos ENSVPAG00000000373 I 0.812
HNRNPCL1 Vicugna pacos ENSVPAG00000007337 I 0.969
RALYL Vicugna pacos ENSVPAG00000008501 I 0.828
hnrnpc Xenopus tropicalis ENSXETG00000016162 I 0.906
ralyl Xenopus tropicalis ENSXETG00000017729 I 0.781
raly Xenopus tropicalis ENSXETG00000019514 I 0.812
fgenesh2_pg.scaffold_6000171 Branchiostoma floridae fgenesh2_pg.scaffold_6000171 I 0.719
Ame_R004237 Ailuropoda melanoleuca Ame_R004237 I 0.812
Ame_R004769 Ailuropoda melanoleuca Ame_R004769 I 0.812
Ame_R016471 Ailuropoda melanoleuca Ame_R016471 I 0.969
AAA60937 Xenopus laevis AAA60937 I 0.906
AAH41534 Xenopus laevis AAH41534 I 0.922
AAH71084 Xenopus laevis AAH71084 I 0.906
RALYL Tursiops truncatus ENSTTRG00000015762 I 0.828
RALY Tursiops truncatus ENSTTRG00000006590 I 0.812
RALY Spermophilus tridecemlineatus ENSSTOG00000008810 I 0.812
ENSSTOG00000012120 Spermophilus tridecemlineatus ENSSTOG00000012120 I 0.953
RALYL Spermophilus tridecemlineatus ENSSTOG00000012583 I 0.797
RALYL Tupaia belangeri ENSTBEG00000005551 I 0.812
RALY Tupaia belangeri ENSTBEG00000009812 I 0.797
ENSTBEG00000011514 Tupaia belangeri ENSTBEG00000011514 I 0.969
RALY Taeniopygia guttata ENSTGUG00000003715 I 0.828
ENSTNIG00000000334 Tetraodon nigroviridis ENSTNIG00000000334 I 0.875
RALYL Tetraodon nigroviridis ENSTNIG00000005594 I 0.828
HNRNPC Takifugu rubripes ENSTRUG00000002153 I 0.844
RALYL Takifugu rubripes ENSTRUG00000003829 I 0.812
RALYL Tarsius syrichta ENSTSYG00000001821 I 0.828
RALY Tarsius syrichta ENSTSYG00000002598 I 0.766
ENSTSYG00000003305 Tarsius syrichta ENSTSYG00000003305 I 0.969
P19600 Xenopus laevis P19600 I 0.906
RALY Oryctolagus cuniculus ENSOCUG00000000477 I 0.781
RALY Anolis carolinensis ENSACAG00000008983 I 0.828
zgc:55701 Danio rerio ENSDARG00000053810 I 0.797
raly Danio rerio ENSDARG00000059972 I 0.797
ENSDNOG00000003161 Dasypus novemcinctus ENSDNOG00000003161 I 0.969
RALY Dasypus novemcinctus ENSDNOG00000003227 I 0.797
RALYL Dasypus novemcinctus ENSDNOG00000005799 I 0.812
Ralyl Dipodomys ordii ENSDORG00000003721 I 0.828
Raly Dipodomys ordii ENSDORG00000013400 I 0.812
LOC100054239 Equus caballus ENSECAG00000012357 I 0.812
LOC100059269 Equus caballus ENSECAG00000017645 I 0.969
RALY Erinaceus europaeus ENSEEUG00000005356 I 0.781
RALYL Erinaceus europaeus ENSEEUG00000007202 I 0.828
HNRNPC Erinaceus europaeus ENSEEUG00000007472 I 0.953
ENSETEG00000001919 Echinops telfairi ENSETEG00000001919 I 0.797
zgc:55733 Danio rerio ENSDARG00000022579 I 0.875
ENSCPOG00000023770 Cavia porcellus ENSCPOG00000023770 I 0.953
ENSCPOG00000001474 Cavia porcellus ENSCPOG00000001474 I 0.953
ENSACAG00000013880 Anolis carolinensis ENSACAG00000013880 I 0.812
Q3SX47_BOVIN Bos taurus ENSBTAG00000011396 I 0.969
Q3T0Y6_BOVIN Bos taurus ENSBTAG00000016524 I 0.812
ENSCAFG00000005504 Canis familiaris ENSCAFG00000005504 I 0.969
RALY Canis familiaris ENSCAFG00000007490 I 0.812
ENSCAFG00000025329 Canis familiaris ENSCAFG00000025329 I 0.812
RALY Choloepus hoffmanni ENSCHOG00000000266 I 0.812
RALYL Choloepus hoffmanni ENSCHOG00000013228 I 0.828
LOC100400868 Callithrix jacchus ENSCJAG00000009033 I 0.969
ENSCJAG00000009354 Callithrix jacchus ENSCJAG00000009354 I 0.906
ENSCJAG00000009449 Callithrix jacchus ENSCJAG00000009449 I 0.781
LOC100401730 Callithrix jacchus ENSCJAG00000018361 I 0.797
RALY Cavia porcellus ENSCPOG00000000309 I 0.812
RALYL Echinops telfairi ENSETEG00000014028 I 0.828
ENSACAG00000003296 Anolis carolinensis ENSACAG00000003296 I 0.969
RALY Gasterosteus aculeatus ENSGACG00000003636 I 0.750
RALYL Myotis lucifugus ENSMLUG00000015286 I 0.828
XM_001095481.1 Macaca mulatta ENSMMUG00000003920 I 0.969
ENSMMUG00000012973 Macaca mulatta ENSMMUG00000012973 I 0.906
HNRNPC Macaca mulatta ENSMMUG00000014809 I 0.969
RALY Macaca mulatta ENSMMUG00000018093 I 0.797
RALYL Macaca mulatta ENSMMUG00000031878 I 0.828
XM_001381335.1 Monodelphis domestica ENSMODG00000002819 I 0.766
XM_001368850.1 Monodelphis domestica ENSMODG00000006606 I 0.953
ENSMODG00000017619 Monodelphis domestica ENSMODG00000017619 I 0.859
Raly Mus musculus ENSMUSG00000027593 I 0.812
Ralyl Mus musculus ENSMUSG00000039717 I 0.828
Hnrnpc Mus musculus ENSMUSG00000060373 I 0.969
ENSOANG00000015707 Ornithorhynchus anatinus ENSOANG00000015707 I 0.953
HNRNPC Myotis lucifugus ENSMLUG00000007853 I 0.969
RALY Myotis lucifugus ENSMLUG00000005330 I 0.812
RALYL Microcebus murinus ENSMICG00000005558 I 0.828
RALYL Gasterosteus aculeatus ENSGACG00000004991 I 0.828
ENSGACG00000017772 Gasterosteus aculeatus ENSGACG00000017772 I 0.859
ENSGACG00000018932 Gasterosteus aculeatus ENSGACG00000018932 I 0.812
RALY Gallus gallus ENSGALG00000002054 I 0.828
LOC770541 Gallus gallus ENSGALG00000015797 I 0.812
ENSGGOG00000003521 Gorilla gorilla ENSGGOG00000003521 I 0.891
RALY Gorilla gorilla ENSGGOG00000022709 I 0.797
HNRNPC Gorilla gorilla ENSGGOG00000023015 I 0.969
ENSGGOG00000026816 Gorilla gorilla ENSGGOG00000026816 I 0.875
RALY Loxodonta africana ENSLAFG00000000321 I 0.812
ENSLAFG00000009341 Loxodonta africana ENSLAFG00000009341 I 0.969
HNRNPC Macropus eugenii ENSMEUG00000010928 I 0.953
RALY Meleagris gallopavo ENSMGAG00000002214 I 0.828
HNRPC_RABIT Oryctolagus cuniculus ENSOCUG00000000339 I 0.969