GA10707-RA (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0070763 T43121_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0284970 RRM 124 193

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q6GLW1 Xenopus laevis Q6GLW1 N 0.786
Thoc4 Mus musculus ENSMUSG00000025134 N 0.800
Refbp2 Mus musculus ENSMUSG00000060244 N 0.786
Gm5698 Mus musculus ENSMUSG00000086151 N 0.000
Gm5699 Mus musculus ENSMUSG00000087346 N 0.000
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.800
THOC4 Oryzias latipes ENSORLG00000012331 N 0.800
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.800
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.800
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.800
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.800
ENSMLUG00000011212 Myotis lucifugus ENSMLUG00000011212 N 0.000
ENSMLUG00000011599 Myotis lucifugus ENSMLUG00000011599 N 0.000
ENSMLUG00000013041 Myotis lucifugus ENSMLUG00000013041 N 0.000
ENSMLUG00000013085 Myotis lucifugus ENSMLUG00000013085 N 0.000
ENSMLUG00000014480 Myotis lucifugus ENSMLUG00000014480 N 0.000
ENSMLUG00000015043 Myotis lucifugus ENSMLUG00000015043 N 0.000
ENSMLUG00000015142 Myotis lucifugus ENSMLUG00000015142 N 0.000
ENSMLUG00000016194 Myotis lucifugus ENSMLUG00000016194 N 0.000
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.800
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.800
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.757
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.786
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.771
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.800
Smp_108820 Schistosoma mansoni Smp_108820 N 0.714
AAH74336 Xenopus laevis AAH74336 N 0.786
AAH92013 Xenopus laevis AAH92013 N 0.800
Q58EA2 Xenopus laevis Q58EA2 N 0.800
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.757
ISCW001860 Ixodes scapularis ISCW001860 N 0.814
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.800
ENSTBEG00000013201 Tupaia belangeri ENSTBEG00000013201 N 0.000
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.814
ENSTNIG00000014136 Tetraodon nigroviridis ENSTNIG00000014136 N 0.000
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.743
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.743
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.800
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.800
ENSMLUG00000010927 Myotis lucifugus ENSMLUG00000010927 N 0.000
ENSMLUG00000010456 Myotis lucifugus ENSMLUG00000010456 N 0.000
ENSMLUG00000010127 Myotis lucifugus ENSMLUG00000010127 N 0.000
tho4 Danio rerio ENSDARG00000077732 N 0.800
LOC100055097 Equus caballus ENSECAG00000018754 N 0.800
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.743
THOC4 Echinops telfairi ENSETEG00000016596 N 0.800
THOC4 Homo sapiens ENSG00000183684 N 0.800
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.800
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.729
THOC4 Gallus gallus ENSGALG00000007237 N 0.800
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.800
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.771
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.800
AAEL005114 Aedes aegypti AAEL005114 N 0.786
AAEL015263 Aedes aegypti AAEL015263 N 0.786
AGAP006733 Anopheles gambiae AGAP006733 N 0.771
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.786
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.800
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.800
THOC4 Canis familiaris ENSCAFG00000005877 N 0.800
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.800
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.800
ENSMLUG00000007634 Myotis lucifugus ENSMLUG00000007634 N 0.000
ENSMLUG00000008410 Myotis lucifugus ENSMLUG00000008410 N 0.000
ENSMLUG00000008923 Myotis lucifugus ENSMLUG00000008923 N 0.000
ENSMLUG00000009247 Myotis lucifugus ENSMLUG00000009247 N 0.000
ENSMLUG00000009447 Myotis lucifugus ENSMLUG00000009447 N 0.000
ENSMLUG00000009449 Myotis lucifugus ENSMLUG00000009449 N 0.000
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.743
ENSMLUG00000009822 Myotis lucifugus ENSMLUG00000009822 N 0.000
ENSMLUG00000007617 Myotis lucifugus ENSMLUG00000007617 N 0.000
ENSMLUG00000007513 Myotis lucifugus ENSMLUG00000007513 N 0.000
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.800
THOC4 Microcebus murinus ENSMICG00000017403 N 0.800
ENSMLUG00000001217 Myotis lucifugus ENSMLUG00000001217 N 0.000
ENSMLUG00000002626 Myotis lucifugus ENSMLUG00000002626 N 0.000
ENSMLUG00000002669 Myotis lucifugus ENSMLUG00000002669 N 0.000
ENSMLUG00000004521 Myotis lucifugus ENSMLUG00000004521 N 0.000
ENSMLUG00000004992 Myotis lucifugus ENSMLUG00000004992 N 0.000
ENSMLUG00000006641 Myotis lucifugus ENSMLUG00000006641 N 0.000
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.786