mgf018937m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf018937m T53770_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf018937m RRM 76 145
mgf018937m RRM 180 251

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK03611.1 Cannabis sativa PK03611.1 N 0.768
Glyma07g32660.1 Glycine max Glyma07g32660.1 N 0.704
Glyma12g19050.1 Glycine max Glyma12g19050.1 N 0.718
mgf005844m Mimulus guttatus mgf005844m N 0.757
mgf011517m Mimulus guttatus mgf011517m N 0.757
GRMZM2G049866 Zea mays GRMZM2G049866 N 0.739
GRMZM2G117715 Zea mays GRMZM2G117715 N 0.725
chr3.CM0282.340.nc Lotus japonicus chr3.CM0282.340.nc N 0.739
LjT18N19.10.nd Lotus japonicus LjT18N19.10.nd N 0.711
MDP0000250519 Malus x domestica MDP0000250519 N 0.761
MDP0000410930 Malus x domestica MDP0000410930 N 0.739
MDP0000575061 Malus x domestica MDP0000575061 N 0.739
MDP0000596919 Malus x domestica MDP0000596919 N 0.754
Glyma06g33940.1 Glycine max Glyma06g33940.1 N 0.718
Cucsa.273510 Cucumis sativus Cucsa.273510 N 0.725
cassava28996.valid.m1 Manihot esculenta cassava28996.valid.m1 N 0.725
PK28408.1 Cannabis sativa PK28408.1 N 0.761
AT3G15010 Arabidopsis thaliana AT3G15010-TAIR-G N 0.746
BRADI2G43460 Brachypodium distachyon BRADI2G43460 N 0.711
XM_002882862.1 Arabidopsis lyrata fgenesh2_kg.3__1628__AT3G15010.2 N 0.725
LOC_Os01g42820 Oryza sativa LOC_Os01g42820 N 0.732
B9GGV7_POPTR Populus trichocarpa POPTR_0001s38640 N 0.782
SB03G027820 Sorghum bicolor Sb03g027820 N 0.746
XM_002894385.1 Arabidopsis lyrata scaffold_105150.1 N 0.732
29900.m001607 Ricinus communis 29900.m001607 N 0.704
cassava18809.valid.m1 Manihot esculenta cassava18809.valid.m1 N 0.718
cassava28994.valid.m1 Manihot esculenta cassava28994.valid.m1 N 0.725
cassava28995.valid.m1 Manihot esculenta cassava28995.valid.m1 N 0.725
ppa005857m Prunus persica ppa005857m N 0.775