GRMZM2G349794 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G349794 T54214_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G349794_P01 RRM 150 210
GRMZM2G349794_P01 RRM 241 309

Links

Other RRM family RBPs
Other Zea mays RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa009298m Prunus persica ppa009298m N 0.708
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.766
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.774
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.803
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.803
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.759
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.810
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.752
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.752
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.752
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.752
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.788
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.788
Glyma08g18810.1 Glycine max Glyma08g18810.1 N 0.701
ppa006808m Prunus persica ppa006808m N 0.796
MDP0000233630 Malus x domestica MDP0000233630 N 0.788
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.745
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.774
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.902
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.883
mgf013366m Mimulus guttatus mgf013366m N 0.766
mgf012896m Mimulus guttatus mgf012896m N 0.796
gw1.29.636.1 Selaginella moellendorfii gw1.29.636.1 N 0.774
gw1.10.957.1 Selaginella moellendorfii gw1.10.957.1 N 0.774
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.752
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.752
BRADI3G13740 Brachypodium distachyon BRADI3G13740 N 0.818
BRADI3G09250 Brachypodium distachyon BRADI3G09250 N 0.701
BRADI2G06650 Brachypodium distachyon BRADI2G06650 N 0.701
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.847
ATRBP37 Arabidopsis thaliana AT4G10610-TAIR-G N 0.766
CID10 Arabidopsis thaliana AT3G49390-TAIR-G N 0.723
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.781
XM_002894411.1 Arabidopsis lyrata Al_scaffold_0001_4812 N 0.701
PK28889.1 Cannabis sativa PK28889.1 N 0.701
PK12463.1 Cannabis sativa PK12463.1 N 0.818
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.781
XM_002882834.1 Arabidopsis lyrata fgenesh2_kg.3__1570__AT3G14450.1 N 0.701
XM_002877626.1 Arabidopsis lyrata fgenesh2_kg.5__1290__AT3G49390.2 N 0.723
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.752
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.708
30068.m002593 Ricinus communis 30068.m002593 N 0.810
29485.m000140 Ricinus communis 29485.m000140 N 0.759
SB07G001560 Sorghum bicolor Sb07g001560 N 0.876
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.847
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.810
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.810
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.715
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.774
PK04894.1 Cannabis sativa PK04894.1 N 0.803